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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: HES1

Summary for HES1

Gene informationGene symbol

HES1

Ensembl ID

ENSG00000114315

Entrez ID

3280

Gene namehes family bHLH transcription factor 1
SynonymsbHLHb39|FLJ20408|HES-1|HRY
Gene typeprotein_coding
UniProtAcc

Q14469


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Dataset with differentially expressed gene: HES1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.5484070.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.333382.70e-09

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.5311967.10e-15

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3288358.87e-34

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.2967980.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2821191.76e-06

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.7216560.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells-0.820830.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-1.027370.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-1.261740.00e+00

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Expression of HES1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HES1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HES1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HES1hsa-miR-464297.5206NM_005524
HES1hsa-miR-519a-2-5p96.587NM_005524
HES1hsa-miR-520b-5p96.587NM_005524
HES1hsa-let-7b-3p95.4212NM_005524
HES1hsa-miR-98-3p95.4212NM_005524
HES1hsa-let-7a-3p95.4212NM_005524
HES1hsa-let-7f-1-3p95.4212NM_005524
HES1hsa-miR-316393.8127NM_005524
HES1hsa-miR-1255b-2-3p93.7682NM_005524
HES1hsa-miR-4704-3p92.068NM_005524
HES1hsa-miR-7112-3p91.157NM_005524
HES1hsa-miR-369-3p88.8954NM_005524
HES1hsa-miR-128384.1828NM_005524
HES1hsa-miR-374a-5p84.0301NM_005524
HES1hsa-miR-372-5p83.1927NM_005524
HES1hsa-miR-30082.8982NM_005524
HES1hsa-miR-381-3p82.8982NM_005524
HES1hsa-miR-374b-5p80.1871NM_005524
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Motifs and transcription factors (TFs) regulating HES1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HES1taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
HES1metacluster_81.7CREB1 (directAnnotation).
HES1transfac_pro__M00492STAT1 (directAnnotation).
HES1metacluster_183.4ETS1 (inferredBy_Orthology).
HES1metacluster_22.29NFE2 (directAnnotation).
HES1metacluster_22.25NFE2L2 (directAnnotation).
HES1metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
HES1metacluster_22.12NFE2; NFE2L1 (directAnnotation).
HES1jaspar__MA0502.2NFYB (directAnnotation).
HES1metacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
HES1transfac_pro__M05683ZNF280A (directAnnotation).
HES1metacluster_22.30NFE2L2 (directAnnotation).
HES1metacluster_22.19NFE2 (directAnnotation).
HES1metacluster_22.28BACH1 (directAnnotation).
HES1transfac_pro__M06601ZNF501 (directAnnotation).
HES1taipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
HES1metacluster_153.3SOX10; SOX10; SOX18; SOX8; SOX8; SOX9; SOX9 (directAnnotation).
HES1taipale_tf_pairs__TEAD4_HOXB13_CYAATAAAATGYN_CAP_reprHOXB13; TEAD4 (directAnnotation).
HES1transfac_pro__M05298OVOL3 (directAnnotation).
HES1hdpi__FLI1FLI1 (directAnnotation).
HES1swissregulon__hs__ETV6ETV6 (directAnnotation).
HES1taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
HES1taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
HES1taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
HES1taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
HES1transfac_public__M00041ATF2; JUN (directAnnotation).
HES1taipale_tf_pairs__ERF_TBX21_TMACACCGGAAG_CAPERF; TBX21 (directAnnotation).
HES1taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
HES1transfac_pro__M05981ZNF233 (directAnnotation).
HES1cisbp__M00808MYPOP (inferredBy_Orthology).
HES1transfac_pro__M06135ZNF28 (directAnnotation).
HES1metacluster_172.6CHD2; E2F1 (directAnnotation).
HES1transfac_pro__M06141ZNF708 (directAnnotation).
HES1transfac_pro__M12697ZNF142 (directAnnotation).
HES1transfac_pro__M03806ZBTB7C (directAnnotation).
HES1transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
HES1tfdimers__MD00483ZBTB14 (directAnnotation).
HES1kznf__ZNF846_Imbeault2017_OM_MEMEZNF846 (directAnnotation).
HES1tfdimers__MD00364WT1 (directAnnotation).
HES1transfac_pro__M04817ZBTB33 (directAnnotation).
HES1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
HES1transfac_pro__M01253CNOT3 (directAnnotation).
HES1taipale_tf_pairs__ERF_SREBF2_NNCACGTGACMGGAARNN_CAP_reprERF; SREBF2 (directAnnotation).
HES1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
HES1metacluster_57.3downMalignant cells

GSE131984_JQ1Pal

NA
HES1metacluster_57.3downMalignant cells

GSE131984_Pac

NA
HES1metacluster_57.3upMalignant cells

GSE168668

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."