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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: DEK

Summary for DEK

Gene informationGene symbol

DEK

Ensembl ID

ENSG00000124795

Entrez ID

7913

Gene nameDEK proto-oncogene
SynonymsD6S231E
Gene typeprotein_coding
UniProtAcc

P35659


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Dataset with differentially expressed gene: DEK

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.2931912.33e-30

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.6037950.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.2583383.24e-14

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.4990435.91e-21

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.4116016.70e-11

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD8+ T cells0.2537890.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.5128343.10e-22

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.5952240.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells0.2835817.22e-20

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.42430.00e+00

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.4786990.00e+00

GSE149214

PC9 cell lineCell lineLung cancerEGFR-mutated non-small cell lung cancer (NSCLC)Targeted therapyerlotinibNAMalignant cells0.2740352.72e-09

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.317090.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.7502360.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.586690.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.4755323.63e-07

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3030736.93e-23

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3376716.35e-16

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4793060.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.5647650.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2617770.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.5892060.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.7063540.00e+00

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Expression of DEK in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to DEK

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating DEK

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
DEKhsa-miR-141-3p98.4827NM_001134709
DEKhsa-miR-200a-3p98.4827NM_001134709
DEKhsa-miR-4722-5p95.7938NM_001134709
DEKhsa-miR-4774-5p95.7216NM_001134709
DEKhsa-miR-548n95.2772NM_001134709
DEKhsa-miR-133a-5p94.6373NM_001134709
DEKhsa-miR-510093.0035NM_001134709
DEKhsa-miR-4762-5p92.3949NM_001134709
DEKhsa-miR-7-2-3p91.9019NM_001134709
DEKhsa-miR-7-1-3p91.9019NM_001134709
DEKhsa-miR-427291.3759NM_001134709
DEKhsa-miR-190a-3p90.8068NM_001134709
DEKhsa-miR-628-5p90.4992NM_001134709
DEKhsa-miR-971890.4992NM_001134709
DEKhsa-miR-138-5p90.0786NM_001134709
DEKhsa-miR-613190.0786NM_001134709
DEKhsa-miR-808489.5459NM_001134709
DEKhsa-miR-6773-3p87.9469NM_001134709
DEKhsa-miR-127-5p87.7747NM_001134709
DEKhsa-miR-4804-3p87.0649NM_001134709
DEKhsa-miR-132287.0362NM_001134709
DEKhsa-miR-223-5p86.9439NM_001134709
DEKhsa-miR-4659b-5p86.5176NM_001134709
DEKhsa-miR-548e-5p86.3691NM_001134709
DEKhsa-miR-4659a-5p86.1769NM_001134709
DEKhsa-miR-6719-3p86.0691NM_001134709
DEKhsa-miR-425-5p85.6387NM_001134709
DEKhsa-miR-181b-5p85.2629NM_001134709
DEKhsa-miR-426285.2629NM_001134709
DEKhsa-miR-316384.2371NM_001134709
DEKhsa-miR-366084.1462NM_001134709
DEKhsa-miR-452684.1462NM_001134709
DEKhsa-miR-469884.0329NM_001134709
DEKhsa-miR-513a-3p83.6543NM_001134709
DEKhsa-miR-513c-3p83.6543NM_001134709
DEKhsa-miR-128683.2183NM_001134709
DEKhsa-miR-464382.86NM_001134709
DEKhsa-miR-26b-3p81.7895NM_001134709
DEKhsa-miR-4760-5p81.7553NM_001134709
DEKhsa-miR-181d-5p81.5259NM_001134709
DEKhsa-miR-181c-5p81.5259NM_001134709
DEKhsa-miR-181a-5p81.5259NM_001134709
DEKhsa-miR-4652-3p81.4752NM_001134709
DEKhsa-miR-6500-3p80.8384NM_001134709
DEKhsa-miR-469680.1787NM_001134709
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Motifs and transcription factors (TFs) regulating DEK

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
DEKtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
DEKmetacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
DEKmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
DEKmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
DEKdbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
DEKmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
DEKtaipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
DEKmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
DEKtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
DEKcisbp__M08198ELF1 (directAnnotation).
DEKtransfac_pro__M00652NRF1 (directAnnotation).
DEKtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
DEKtransfac_pro__M04866HDAC2 (directAnnotation).
DEKmetacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
DEKswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
DEKtransfac_pro__M05574ZFP92 (directAnnotation).
DEKtransfac_pro__M04944GABPA (directAnnotation).
DEKtransfac_pro__M01182HINFP (directAnnotation).
DEKhdpi__FLI1FLI1 (directAnnotation).
DEKcisbp__M02645ETS1 (directAnnotation).
DEKtaipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
DEKtaipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
DEKmetacluster_141.2E2F2; E2F3 (directAnnotation).
DEKmetacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
DEKtaipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
DEKjaspar__MA1460.1YY1 (inferredBy_Orthology).
DEKmetacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
DEKtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
DEKhdpi__TIMELESSTIMELESS (directAnnotation).
DEKtaipale_tf_pairs__E2F1_EOMES_RGGTGTNNNGGCGSNNTNNCRSNN_CAPE2F1; EOMES (directAnnotation).
DEKhomer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
DEKmetacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
DEKmetacluster_141.9TAF1; YY1; YY1 (directAnnotation).
DEKtransfac_pro__M06042ZNF208 (directAnnotation).
DEKtransfac_pro__M06404ZNF497 (directAnnotation).
DEKjaspar__MA0502.2NFYB (directAnnotation).
DEKmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
DEKtfdimers__MD00154MZF1; SREBF1 (directAnnotation).
DEKkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
DEKkznf__ZSCAN29_TF_Evolution_PBMZSCAN29 (directAnnotation).
DEKtaipale_tf_pairs__FOXJ3_ELF1_NNARAAAACCGAAWMN_CAPELF1; FOXJ3 (directAnnotation).
DEKkznf__ZNF343_Imbeault2017_OM_RCADEZNF343 (directAnnotation).
DEKtaipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
DEKtaipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
DEKtaipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
DEKtaipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
DEKtaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
DEKmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
DEKtaipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
DEKtaipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."