DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene (This gene does not contain this module)

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target

Gene: COX5B

Summary for COX5B

Gene informationGene symbol

COX5B

Ensembl ID

ENSG00000135940

Entrez ID

1329

Gene namecytochrome c oxidase subunit 5B
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P10606


Top

Dataset with differentially expressed gene: COX5B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs-0.4120685.25e-12

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprepDCs-0.4912755.32e-04

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.5808570.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells-0.2923020.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2574134.91e-12

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.279940.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3198191.27e-18

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.3457424.84e-05

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.251491.90e-08

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.416131.31e-19

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.4182679.72e-03

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.4223241.64e-18

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2922640.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells-0.2711825.04e-06

GSE161195

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapyDARA-KRD (daratumumab + carfilzomib + lenalidomide + dexamethasone)postMalignant cells0.2766690.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.4174360.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.5027410.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.7627643.40e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.3414426.35e-08

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes-0.343584.18e-08

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.4098690.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-1.507170.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-1.321690.00e+00

Top

Expression of COX5B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to COX5B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating COX5B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)

Top

Motifs and transcription factors (TFs) regulating COX5B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
COX5Btaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
COX5Bmetacluster_141.9TAF1; YY1; YY1 (directAnnotation).
COX5Bmetacluster_32.24ZNF287 (directAnnotation).
COX5Btfdimers__MD00069IKZF1; PDX1 (directAnnotation).
COX5Btransfac_pro__M06408ZSCAN30 (directAnnotation).
COX5Btaipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
COX5Btransfac_pro__M04861SIX5 (directAnnotation).
COX5Btaipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNNYWTTGT_CAP_reprETV2; SOX15 (directAnnotation).
COX5Btaipale_tf_pairs__ETV7_NNGGAAGTGCTTCCNN_HTETV7 (directAnnotation).
COX5Btaipale_tf_pairs__ETV5_CEBPD_NSCGGANNTTRCGYAAN_CAPCEBPD; ETV5 (directAnnotation).
COX5Btransfac_pro__M07483CXXC1 (directAnnotation).
COX5Bhomer__NCCACGTG_c-MycMYC (directAnnotation).
COX5Btaipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
COX5Btransfac_pro__M05706ZNF20 (directAnnotation).
COX5Bmetacluster_141.2E2F2; E2F3 (directAnnotation).
COX5Bjaspar__MA1935.1FOXI1 (directAnnotation).
COX5Bmetacluster_166.5ERG; ETV2; FLI1 (directAnnotation).
COX5Bmetacluster_183.3EHF; ELF3; FLI1; SPIB (directAnnotation). EHF; EHF; ELF2; ELF3; ELF4; ELF5; ERG; ERG; ETV3; ETV6; FLI1; SPI1; SPI1 (inferredBy_Orthology).
COX5Bmetacluster_183.4ETS1 (inferredBy_Orthology).
COX5Btransfac_pro__M00655ETV4 (directAnnotation).
COX5Bhomer__ACAGGATGTGGT_ETS_RUNXRUNX1 (directAnnotation).
COX5Btaipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
COX5Btfdimers__MD00282GFI1; GFI1B; SMAD1 (directAnnotation).
COX5Btfdimers__MD00362ARID3A; BCL6 (directAnnotation).
COX5Btaipale_tf_pairs__ETV2_DLX3_RSCGGAANNNNNNNTAATKR_CAP_reprDLX3; ETV2 (directAnnotation).
COX5Btaipale_cyt_meth__ZBTB2_NTTTMCGGTWAN_eDBDZBTB2 (directAnnotation).
COX5Btaipale_tf_pairs__ELK1_FOXI1_WGTTKMCGGAWRTN_CAPELK1; FOXI1 (directAnnotation).
COX5Btaipale_tf_pairs__HOXB2_ESRRB_TAATKRNNNNNNAAGGTCA_CAP_reprESRRB; HOXB2 (directAnnotation).
COX5Btaipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
COX5Btaipale_tf_pairs__ETV2_TEF_RSCGGAWNTTRCGYAAN_CAPETV2; TEF (directAnnotation).
COX5Btaipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
COX5Bjaspar__MA1509.1IRF6 (directAnnotation).
COX5Btaipale_tf_pairs__ETV2_CEBPD_RSCGGANNTTGCGYAAN_CAP_reprCEBPD; ETV2 (directAnnotation).
COX5Btaipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_1SPIB; TEAD4 (directAnnotation).
COX5Btransfac_pro__M05560AEBP2 (directAnnotation).
COX5Btaipale_tf_pairs__FLI1_ETV7_NSMGGACGGAYNTCCKSN_CAPETV7; FLI1 (directAnnotation).
COX5Btaipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
COX5Btransfac_pro__M04944GABPA (directAnnotation).
COX5Bmetacluster_168.11ZNF771; ZNF771 (directAnnotation).
COX5Btaipale_cyt_meth__ZBTB2_NTTTCCGGTAMN_eDBD_meth_reprZBTB2 (directAnnotation).
COX5Btaipale_tf_pairs__ERF_CEBPD_RSMGGAANTTGCGYAAN_CAPCEBPD; ERF (directAnnotation).
COX5Btaipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
COX5Btaipale_tf_pairs__FLI1_CEBPD_RNCGGANNTTGCGCAAN_CAPCEBPD; FLI1 (directAnnotation).
COX5Btransfac_pro__M05612ZNF189 (directAnnotation).
COX5Btransfac_pro__M05418ZNF521 (directAnnotation).
COX5Bmetacluster_21.5HOXB2; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF2; HSF2; HSF2; HSF2; HSF2; HSF2; HSF4; HSF4; HSF4 (directAnnotation). HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF2; HSF2; HSF2; HSF2; HSF4; HSF4; HSF4; HSF4; HSF5; HSF5; HSF5; HSF5; HSFX1; HSFX1; HSFX1; HSFX1; HSFX2; HSFX2; HSFX2; HSFX2; HSFX3; HSFX3; HSFX3; HSFX3; HSFX4; HSFX4; HSFX4; HSFX4; HSFY1; HSFY1; HSFY1; HSFY1; HSFY2; HSFY2; HSFY2; HSFY2 (inferredBy_Orthology).
COX5Btransfac_pro__M05877ZNF467 (inferredBy_Orthology).
COX5Btfdimers__MD00208IRF1; LTF (directAnnotation).
COX5Bmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
COX5Bmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
Page: 1 2 3

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
COX5B"Cholic Acid"

DB02659

small molecule
COX5B"N-Formylmethionine"

DB04464

small molecule
Page: 1




1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."