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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: COTL1

Summary for COTL1

Gene informationGene symbol

COTL1

Ensembl ID

ENSG00000103187

Entrez ID

23406

Gene namecoactosin like F-actin binding protein 1
SynonymsCLP
Gene typeprotein_coding
UniProtAcc

Q14019


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Dataset with differentially expressed gene: COTL1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.5232941.61e-04

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3016941.71e-20

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.2831413.27e-21

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.5133580.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.7196831.89e-34

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.4500527.61e-16

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.292111.50e-07

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3789090.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.3621150.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.4568171.55e-31

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.500481.23e-15

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.4301971.09e-06

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.4943150.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.3222010.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostcDCs-0.2898321.60e-03

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-0.2566694.25e-22

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells-0.3220910.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostNK cells-0.4328130.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs0.4283243.53e-12

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells-0.3118290.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD8+ T cells0.5966040.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD4+ T cells0.3931971.04e-40

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preCD4+ T cells-0.353166.90e-17

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preCD8+ T cells-0.4639790.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preNK cells-0.297610.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD4+ T cells-0.6067311.01e-12

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells-0.5241719.38e-04

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.4612980.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3866052.12e-34

GSE164237

patientsPeripheral blood mononuclear cellsMelanomaAdvanced stages of melanoma ImmunotherapypembrolizumabpreCD8+ T cells-0.3796470.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.3239751.21e-02

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-1.269465.12e-04

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.4513941.30e-21

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.2626294.89e-06

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)postNK cells0.3308241.18e-14

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preNK cells-0.2793450.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postB cells-0.634631.11e-03

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreB cells0.3660121.17e-03

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro0.2616035.71e-32

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells0.3443435.35e-16

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostB cells-0.7147691.66e-02

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMono/Macro-0.3519281.29e-27

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostNK cells-0.3964252.17e-24

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostCD8+ T cells-0.4000110.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.252620.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostMalignant cells-0.4777550.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostErythrocytes0.7079736.72e-04

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostB cells1.540551.78e-05

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-1.695930.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells0.2891155.24e-32

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD4+ T cells-0.4626313.13e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-1.293241.11e-17

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreNK cells-0.8304341.99e-06

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.5300980.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostCD4+ T cells-1.016222.71e-07

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostCD8+ T cells-0.4344971.08e-20

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD4+ T cells-0.7133211.29e-04

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD8+ T cells-0.5024511.18e-13

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2889417.77e-18

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMono/Macro-0.2897576.61e-17

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasoneprecDCs-0.3672112.17e-03

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Expression of COTL1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to COTL1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating COTL1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
COTL1hsa-miR-654-5p91.6539NM_021149
COTL1hsa-miR-541-3p91.6539NM_021149
COTL1hsa-miR-101-3p89.5459NM_021149
COTL1hsa-miR-368687.2844NM_021149
COTL1hsa-miR-7111-5p82.4342NM_021149
COTL1hsa-miR-6870-5p82.4342NM_021149
COTL1hsa-miR-4723-5p82.4342NM_021149
COTL1hsa-miR-569882.4342NM_021149
COTL1hsa-miR-6827-5p82.3905NM_021149
COTL1hsa-miR-5006-5p81.0693NM_021149
COTL1hsa-miR-451480.8726NM_021149
COTL1hsa-miR-469280.8726NM_021149
COTL1hsa-miR-548g-3p80.1075NM_021149
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Motifs and transcription factors (TFs) regulating COTL1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
COTL1jaspar__MA1708.1ETV7 (directAnnotation).
COTL1taipale_tf_pairs__ELK1_EOMES_RSCGGAANNAGGYGYNA_CAP_reprELK1; EOMES (directAnnotation).
COTL1metacluster_22.18BACH2 (inferredBy_Orthology).
COTL1metacluster_145.10ZNF24 (directAnnotation).
COTL1kznf__ZNF182_Imbeault2017_OM_RCADEZNF182 (directAnnotation).
COTL1hocomoco__BPTF_HUMAN.H11MO.0.DBPTF (directAnnotation).
COTL1transfac_pro__M05768ZNF544 (directAnnotation).
COTL1metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
COTL1jaspar__MA0502.2NFYB (directAnnotation).
COTL1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
COTL1metacluster_7.13ZFX (directAnnotation).
COTL1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
COTL1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
COTL1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
COTL1metacluster_191.1ZNF528; ZNF528; ZNF528 (directAnnotation).
COTL1transfac_pro__M05941ZNF471 (directAnnotation).
COTL1transfac_pro__M06568ZNF501 (directAnnotation).
COTL1jaspar__MA1945.1FIGLA (directAnnotation).
COTL1transfac_pro__M06493ZNF668 (inferredBy_Orthology).
COTL1transfac_pro__M06990ZNF236 (directAnnotation).
COTL1metacluster_52.6ZSCAN29; ZSCAN29 (directAnnotation).
COTL1jaspar__MA1941.1FIGLA (directAnnotation).
COTL1transfac_pro__M06607ZNF560 (directAnnotation).
COTL1transfac_pro__M06968ZNF467 (inferredBy_Orthology).
COTL1metacluster_10.31MYC (directAnnotation).
COTL1transfac_pro__M05933ZNF552 (directAnnotation).
COTL1taipale_tf_pairs__POU2F1_DLX2_TGMATATKCANNNNNTAATKR_CAP_reprDLX2; POU2F1 (directAnnotation).
COTL1taipale_tf_pairs__CLOCK_NHLH1_NRCAGCTGNNNNNCACGTGNN_CAP_reprCLOCK; NHLH1 (directAnnotation).
COTL1nitta__Ets98B_TTCCCC20NTA_KH_TKGCGGATGCN_m1_c3SPDEF (inferredBy_Orthology).
COTL1transfac_pro__M06045ZNF729 (directAnnotation).
COTL1jaspar__MA1633.2BACH1 (directAnnotation).
COTL1taipale_tf_pairs__TEAD4_HOXB13_NTCGTAAAATGC_CAPHOXB13; TEAD4 (directAnnotation).
COTL1taipale_tf_pairs__TEAD4_HES7_RCATTCCNNCRCGYGYN_CAP_reprHES7; TEAD4 (directAnnotation).
COTL1transfac_pro__M06741ZNF70 (directAnnotation).
COTL1jaspar__MA0033.2FOXL1 (directAnnotation).
COTL1metacluster_108.1ZNF101; ZNF697 (directAnnotation).
COTL1transfac_pro__M06075ZNF197 (directAnnotation).
COTL1tfdimers__MD00046GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; SMAD4 (directAnnotation).
COTL1taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
COTL1transfac_pro__M06231ZNF273 (directAnnotation).
COTL1transfac_pro__M06344ZNF530 (directAnnotation).
COTL1taipale_tf_pairs__GCM1_ELK3_ACCCGCANCCGGAAGN_CAP_reprELK3; GCM1 (directAnnotation).
COTL1metacluster_134.4AHDC1; ARID5B; FOXA1; FOXA1; FOXA2; FOXA2; FOXA3; FOXA3; FOXJ3; FOXO3; FOXP1; FOXP4 (directAnnotation).
COTL1taipale_tf_pairs__E2F3_DRGX_SGCGCTAATTKN_CAP_reprDRGX; E2F3 (directAnnotation).
COTL1kznf__GTF3A_Schmitges2016_RCADEGTF3A (directAnnotation).
COTL1metacluster_22.15BACH1 (directAnnotation).
COTL1metacluster_22.14BACH1 (inferredBy_Orthology).
COTL1metacluster_145.4ZNF716 (directAnnotation). FOXA2; FOXB2 (inferredBy_Orthology).
COTL1transfac_pro__M06452ZNF567 (directAnnotation).
COTL1kznf__ZNF334_Imbeault2017_OM_MEMEZNF334 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."