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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CDK17

Summary for CDK17

Gene informationGene symbol

CDK17

Ensembl ID

ENSG00000059758

Entrez ID

5128

Gene namecyclin dependent kinase 17
SynonymsPCTAIRE2|PCTK2
Gene typeprotein_coding
UniProtAcc

Q00537


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Dataset with differentially expressed gene: CDK17

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.3176280.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.3689880.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3287061.15e-42

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2703678.00e-18

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD8+ T cells0.3044680.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.3002520.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3845564.20e-45

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3309810.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.4593690.00e+00

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Expression of CDK17 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CDK17

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CDK17

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CDK17hsa-miR-548ap-3p98.9947NM_002595
CDK17hsa-miR-548t-3p98.9947NM_002595
CDK17hsa-miR-548aa98.9947NM_002595
CDK17hsa-miR-196a-1-3p98.0899NM_001170464
CDK17hsa-miR-3691-3p97.9036NM_001170464
CDK17hsa-miR-504797.7677NM_001170464
CDK17hsa-miR-1301-3p97.7677NM_001170464
CDK17hsa-miR-450497.767NM_002595
CDK17hsa-miR-5692a97.7073NM_002595
CDK17hsa-miR-433-3p97.6984NM_001170464
CDK17hsa-miR-548as-3p97.4355NM_001170464
CDK17hsa-miR-471997.0353NM_001170464
CDK17hsa-miR-548ay-3p96.3641NM_001170464
CDK17hsa-miR-548at-3p96.3641NM_001170464
CDK17hsa-miR-590-3p96.3612NM_001170464
CDK17hsa-miR-428296.1934NM_001170464
CDK17hsa-miR-582-5p96.1701NM_001170464
CDK17hsa-miR-200c-3p95.8931NM_001170464
CDK17hsa-miR-200b-3p95.8931NM_001170464
CDK17hsa-miR-42995.8931NM_001170464
CDK17hsa-miR-477595.1294NM_001170464
CDK17hsa-miR-7154-5p94.9687NM_001170464
CDK17hsa-miR-132394.9234NM_001170464
CDK17hsa-miR-5590-3p94.9043NM_001170464
CDK17hsa-miR-142-5p94.9043NM_001170464
CDK17hsa-miR-469894.6931NM_002595
CDK17hsa-miR-428494.6611NM_001170464
CDK17hsa-miR-548o-3p94.502NM_001170464
CDK17hsa-miR-576-5p94.4974NM_002595
CDK17hsa-miR-95-5p94.4714NM_001170464
CDK17hsa-miR-3529-3p93.8457NM_002595
CDK17hsa-miR-426292.5989NM_001170464
CDK17hsa-miR-4789-3p92.1596NM_002595
CDK17hsa-miR-6875-3p91.0936NM_001170464
CDK17hsa-miR-10527-5p91.085NM_001170464
CDK17hsa-miR-548at-5p90.9921NM_002595
CDK17hsa-miR-24-3p90.9526NM_001170464
CDK17hsa-miR-203b-5p90.9507NM_001170464
CDK17hsa-miR-6718-5p90.9507NM_001170464
CDK17hsa-miR-480390.7163NM_001170464
CDK17hsa-miR-548h-3p90.5856NM_001170464
CDK17hsa-miR-548z90.5856NM_001170464
CDK17hsa-miR-548bb-3p90.5856NM_001170464
CDK17hsa-miR-548d-3p90.5856NM_001170464
CDK17hsa-miR-548ac90.5856NM_001170464
CDK17hsa-miR-199b-3p90.5841NM_001170464
CDK17hsa-miR-199a-3p90.5841NM_001170464
CDK17hsa-miR-552-5p90.5758NM_002595
CDK17hsa-miR-3129-5p90.3601NM_001170464
CDK17hsa-miR-16-2-3p90.1677NM_001170464
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Motifs and transcription factors (TFs) regulating CDK17

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CDK17transfac_pro__M04817ZBTB33 (directAnnotation).
CDK17transfac_pro__M07310SP5 (directAnnotation).
CDK17flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
CDK17hdpi__NRLNRL (directAnnotation).
CDK17kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
CDK17transfac_pro__M07387ZBTB7A (directAnnotation).
CDK17transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
CDK17transfac_pro__M01783SP2 (directAnnotation).
CDK17metacluster_61.1DEAF1; DEAF1 (directAnnotation).
CDK17cisbp__M07938E2F1 (directAnnotation).
CDK17tfdimers__MD00483ZBTB14 (directAnnotation).
CDK17transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CDK17hdpi__GTF3C2GTF3C2 (directAnnotation).
CDK17dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
CDK17metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
CDK17taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
CDK17taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
CDK17transfac_pro__M03806ZBTB7C (directAnnotation).
CDK17metacluster_135.11NR2C2 (directAnnotation).
CDK17taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
CDK17transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CDK17transfac_pro__M00800TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CDK17cisbp__M00343PAX6 (directAnnotation).
CDK17transfac_pro__M12697ZNF142 (directAnnotation).
CDK17metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
CDK17kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
CDK17taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
CDK17transfac_pro__M12694ZFP14 (directAnnotation).
CDK17transfac_pro__M01253CNOT3 (directAnnotation).
CDK17transfac_pro__M04617ZBTB7A (directAnnotation).
CDK17metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CDK17transfac_pro__M02090E2F4 (directAnnotation).
CDK17metacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
CDK17metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
CDK17transfac_pro__M07437ZBTB2 (directAnnotation).
CDK17cisbp__M00775ZBTB1 (inferredBy_Orthology).
CDK17transfac_pro__M00514ATF4 (directAnnotation).
CDK17metacluster_126.2ZBTB4; ZBTB4 (directAnnotation).
CDK17taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
CDK17metacluster_3.10KLF2; KLF4 (directAnnotation).
CDK17transfac_pro__M07436WT1 (directAnnotation).
CDK17transfac_pro__M08894OVOL1; OVOL2 (directAnnotation).
CDK17metacluster_3.14WT1; WT1 (directAnnotation).
CDK17metacluster_19.9AHR; AHR; SREBF1; SREBF1; SREBF2; SREBF2 (directAnnotation). SREBF1 (inferredBy_Orthology).
CDK17taipale_cyt_meth__GCM1_RTGCGGGTN_eDBDGCM1 (directAnnotation).
CDK17jaspar__MA1650.1ZBTB14 (directAnnotation).
CDK17taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
CDK17cisbp__M00809PRDM11 (inferredBy_Orthology).
CDK17transfac_pro__M00322MAX; MYC (directAnnotation).
CDK17metacluster_144.8ZNF30; ZNF30 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CDK17"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."