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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CDK1

Summary for CDK1

Gene informationGene symbol

CDK1

Ensembl ID

ENSG00000170312

Entrez ID

983

Gene namecyclin dependent kinase 1
SynonymsCDC2|CDC28A
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CDK1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-0.4968791.86e-03

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4135316.97e-28

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3208569.74e-04

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes-0.3521333.87e-14

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.6308870.00e+00

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.3883430.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.5995230.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.4556330.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4649337.16e-14

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3932231.09e-06

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.5551111.12e-12

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.5007042.16e-13

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.3257320.00e+00

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Expression of CDK1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CDK1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CDK1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating CDK1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CDK1hsa-miR-5011-5p96.3498NM_001786
CDK1hsa-miR-3913-3p94.8117NM_001786
CDK1hsa-miR-4760-3p93.9784NM_001786
CDK1hsa-miR-613093.1552NM_001170406
CDK1hsa-miR-451093.1552NM_001170406
CDK1hsa-miR-612793.1552NM_001170406
CDK1hsa-miR-613393.1552NM_001170406
CDK1hsa-miR-612993.1552NM_001170406
CDK1hsa-miR-7-1-3p91.305NM_001786
CDK1hsa-miR-7-2-3p91.305NM_001786
CDK1hsa-miR-195-3p91.0285NM_001786
CDK1hsa-miR-16-2-3p91.0285NM_001786
CDK1hsa-miR-361890.5422NM_001170406
CDK1hsa-miR-608390.4753NM_001170406
CDK1hsa-miR-469690.203NM_001170406
CDK1hsa-miR-362-3p88.887NM_001170406
CDK1hsa-miR-329-3p88.887NM_001170406
CDK1hsa-miR-49688.1725NM_001170406
CDK1hsa-miR-394187.7373NM_001170406
CDK1hsa-miR-188-3p87.6315NM_001170406
CDK1hsa-miR-469886.7904NM_001170406
CDK1hsa-miR-80286.7599NM_001786
CDK1hsa-miR-2114-5p85.9774NM_001170406
CDK1hsa-miR-391185.9708NM_001170406
CDK1hsa-miR-208b-5p85.9209NM_001786
CDK1hsa-miR-208a-5p85.9209NM_001786
CDK1hsa-miR-64985.0388NM_001170406
CDK1hsa-miR-5009-3p84.8918NM_001786
CDK1hsa-miR-6762-3p83.4748NM_001786
CDK1hsa-miR-4666a-5p82.3048NM_001170406
CDK1hsa-miR-186-3p81.3116NM_001786
CDK1hsa-miR-126781.0257NM_001786
CDK1hsa-miR-316380.7095NM_001170406
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Motifs and transcription factors (TFs) regulating CDK1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CDK1transfac_pro__M04826EP300 (directAnnotation).
CDK1taipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
CDK1metacluster_102.2ZBED1 (directAnnotation).
CDK1transfac_public__M00209NFYA; NFYB; NFYC (directAnnotation).
CDK1transfac_pro__M06660ZNF670 (directAnnotation).
CDK1taipale_cyt_meth__IRF6_ACCGAWACY_FL_methIRF6 (directAnnotation).
CDK1taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
CDK1taipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
CDK1transfac_pro__M05711ZNF37A (directAnnotation).
CDK1transfac_pro__M06071ZNF814 (directAnnotation).
CDK1metacluster_141.2E2F2; E2F3 (directAnnotation).
CDK1transfac_pro__M06432ZNF571 (directAnnotation).
CDK1transfac_pro__M06487ZNF695 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CDK1"Alsterpaullone"

DB04014

small molecule
CDK1"Alvocidib"

DB03496

small molecule
CDK1"AT-7519"

DB08142

small molecule
CDK1"Avotaciclib"

DB16652

small molecule
CDK1"Fostamatinib"

DB12010

small molecule
CDK1"Hymenialdisine"

DB02950

small molecule
CDK1"Indirubin-3'-monoxime"

DB02052

small molecule
CDK1"Olomoucine"

DB02116

small molecule
CDK1"Seliciclib"

DB06195

small molecule
CDK1"SU9516"

DB03428

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."