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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ABI2

Summary for ABI2

Gene informationGene symbol

ABI2

Ensembl ID

ENSG00000138443

Entrez ID

10152

Gene nameabl interactor 2
SynonymsABI-2|ABI2B|AblBP3|AIP-1|argBPIA|SSH3BP2
Gene typeprotein_coding
UniProtAcc

Q9NYB9


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Dataset with differentially expressed gene: ABI2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4035250.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.3088570.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3892979.24e-24

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3850810.00e+00

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Expression of ABI2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ABI2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ABI2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ABI2hsa-miR-193a-3p95.5648NM_001282925
ABI2hsa-miR-193b-3p94.5401NM_001282925
ABI2hsa-miR-120092.3527NM_001282925
ABI2hsa-miR-6778-3p91.059NM_001282925
ABI2hsa-miR-877-3p90.94NM_001282925
ABI2hsa-miR-465488.7784NM_001282925
ABI2hsa-miR-365888.6568NM_001282925
ABI2hsa-miR-4668-5p88.0079NM_001282925
ABI2hsa-miR-495-5p87.9437NM_001282925
ABI2hsa-miR-1211786.6681NM_001282925
ABI2hsa-miR-806686.6452NM_001282925
ABI2hsa-miR-34b-3p86.3283NM_001282925
ABI2hsa-miR-4769-5p86.2715NM_001282925
ABI2hsa-miR-6726-5p86.2333NM_001282925
ABI2hsa-miR-92086.2333NM_001282925
ABI2hsa-miR-625-5p85.6682NM_001282925
ABI2hsa-miR-447185.6589NM_001282925
ABI2hsa-miR-5591-5p85.5998NM_001282925
ABI2hsa-miR-430085.5998NM_001282925
ABI2hsa-miR-548d-3p85.0107NM_001282925
ABI2hsa-miR-548ac85.0107NM_001282925
ABI2hsa-miR-548bb-3p85.0107NM_001282925
ABI2hsa-miR-548z85.0107NM_001282925
ABI2hsa-miR-548h-3p85.0107NM_001282925
ABI2hsa-let-7c-3p84.6614NM_001282925
ABI2hsa-miR-548aa83.6645NM_001282925
ABI2hsa-miR-548t-3p83.6645NM_001282925
ABI2hsa-miR-548ap-3p83.6645NM_001282925
ABI2hsa-miR-183-5p82.449NM_001282925
ABI2hsa-miR-664b-3p82.3792NM_001282925
ABI2hsa-miR-579-3p82.3792NM_001282925
ABI2hsa-miR-120581.9695NM_001282925
ABI2hsa-miR-10394-5p81.9695NM_001282925
ABI2hsa-miR-153-5p81.7469NM_001282925
ABI2hsa-miR-805981.6061NM_001282925
ABI2hsa-miR-1236-3p81.4289NM_001282925
ABI2hsa-miR-664a-3p80.1849NM_001282925
ABI2hsa-miR-331-3p80.0422NM_001282925
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Motifs and transcription factors (TFs) regulating ABI2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ABI2transfac_pro__M02898SMAD3 (directAnnotation).
ABI2transfac_public__M00491PATZ1 (directAnnotation).
ABI2transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ABI2metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
ABI2metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ABI2cisbp__M00249WT1 (directAnnotation).
ABI2transfac_pro__M01122ZNF219 (directAnnotation).
ABI2dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
ABI2kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
ABI2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
ABI2kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
ABI2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ABI2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
ABI2taipale_tf_pairs__GCM1_ERG_RTRYGGGCGGAARKN_CAPERG; GCM1 (directAnnotation).
ABI2metacluster_84.2RARA (directAnnotation).
ABI2metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
ABI2transfac_pro__M01253CNOT3 (directAnnotation).
ABI2dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
ABI2metacluster_3.10KLF2; KLF4 (directAnnotation).
ABI2jaspar__MA1721.1ZNF93 (directAnnotation).
ABI2metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
ABI2homer__AAGGKGRCGCAGGCA_ZNF165ZNF165 (directAnnotation).
ABI2taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
ABI2kznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
ABI2cisbp__M00341PAX6 (directAnnotation).
ABI2taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
ABI2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWGNNNNNTCCGGNN_CAPGCM1; SPDEF (directAnnotation).
ABI2transfac_pro__M01199TRIM28 (directAnnotation).
ABI2metacluster_35.2EGR1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF3; ELF4; ELF4; ELK1; ELK3; ELK4; ERG; ETS1; ETS1; ETS2; ETV1; ETV1; ETV5; ETV5; ETV6; FLI1; FLI1; GABPA; GABPA; GABPA; GABPB1; GABPB1; GABPB1; ZBTB7A (directAnnotation). ELF2; ELF2; ERG; ERG; ETS2; FLI1; GABPA; IKZF3; SPIC (inferredBy_Orthology).
ABI2tfdimers__MD00391KLF4 (directAnnotation).
ABI2tfdimers__MD00441OVOL2; RELA (directAnnotation).
ABI2metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
ABI2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ABI2cisbp__M00968MTF2 (directAnnotation).
ABI2transfac_pro__M01973PLAG1 (directAnnotation).
ABI2transfac_pro__M12697ZNF142 (directAnnotation).
ABI2metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
ABI2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
ABI2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
ABI2kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
ABI2metacluster_160.20JUND; PRDM15 (directAnnotation).
ABI2metacluster_24.5ZNF675; ZNF675 (directAnnotation).
ABI2taipale_tf_pairs__ETV5_EOMES_RNGTGNNNNNNNNNNNNNRCRCCGGAWSN_CAPEOMES; ETV5 (directAnnotation).
ABI2metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
ABI2kznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
ABI2transfac_pro__M04817ZBTB33 (directAnnotation).
ABI2swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
ABI2transfac_pro__M05712ZNF134 (directAnnotation).
ABI2taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."