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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RGCC

Summary for RGCC

Gene informationGene symbol

RGCC

Ensembl ID

ENSG00000102760

Entrez ID

28984

Gene nameregulator of cell cycle
SynonymsbA157L14.2|C13orf15|RGC-32|RGC32
Gene typeprotein_coding
UniProtAcc

Q9H4X1


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Dataset with differentially expressed gene: RGCC

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells4.541344.70e-13

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.6602370.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD4+ T cells-0.6465960.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.730541.10e-39

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprePlasma cells0.4318722.56e-39

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreB cells-0.4580633.66e-05

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells-0.9882584.96e-16

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-1.165220.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-2.098650.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-1.989450.00e+00

GSE150930

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaMucosa-assisted lymphoid tissue (MALT) lymphomaImmunotherapyrituximab + cyclophosphamide + fludarabineNAMalignant cells-0.4458794.64e-21

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.7564772.29e-25

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.5425982.69e-15

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.365463.42e-03

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postPlasma cells0.5499112.87e-03

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells0.471291.18e-04

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreNK cells-0.3818511.89e-36

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro-0.6112111.55e-39

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells-0.513244.21e-33

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3621660.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreCD8+ T cells0.3099258.19e-19

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMono/Macro0.3080221.12e-14

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-1.649720.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells0.631690.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.5456280.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.5129180.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells0.7741226.19e-17

GSE152469

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibNAMalignant cells0.4040610.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells0.6345580.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasoneprecDCs-0.3789899.12e-03

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Expression of RGCC in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RGCC

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RGCC

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RGCChsa-miR-5011-5p94.7675NM_014059
RGCChsa-miR-656-3p94.6244NM_014059
RGCChsa-miR-548e-5p92.4619NM_014059
RGCChsa-miR-430792.3102NM_014059
RGCChsa-miR-7856-5p91.7075NM_014059
RGCChsa-miR-520d-5p91.388NM_014059
RGCChsa-miR-524-5p91.388NM_014059
RGCChsa-miR-428791.1844NM_014059
RGCChsa-miR-4685-3p91.1844NM_014059
RGCChsa-miR-1277-5p91.1747NM_014059
RGCChsa-miR-6867-3p86.6886NM_014059
RGCChsa-miR-4446-3p82.165NM_014059
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Motifs and transcription factors (TFs) regulating RGCC

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RGCChocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
RGCCtransfac_pro__M02015FOXA3 (directAnnotation).
RGCCtransfac_pro__M05905ZNF649 (directAnnotation).
RGCCmetacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
RGCCkznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
RGCCtransfac_pro__M05607MYBL1 (directAnnotation).
RGCCmetacluster_168.3NR4A1 (directAnnotation).
RGCCmetacluster_130.15ARID5B; ARID5B; BPTF (directAnnotation).
RGCCtfdimers__MD00156CRX (directAnnotation).
RGCCtaipale_tf_pairs__FOXJ2_HOXB13_TTTWATNRNMAACA_CAP_reprFOXJ2; HOXB13 (directAnnotation).
RGCChdpi__TRMT1TRMT1 (directAnnotation).
RGCCswissregulon__mm__Nkx2-3NKX2-3 (inferredBy_Orthology).
RGCCcisbp__M02686NKX2-5 (inferredBy_Orthology).
RGCCtaipale_tf_pairs__ELK1_PAX5_RSCGGAACYACGCWYSANTG_CAP_reprELK1; PAX5 (directAnnotation).
RGCCtaipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
RGCCtransfac_pro__M07399NKX6-1 (directAnnotation).
RGCCmetacluster_119.2CCNT2; GATA1; GATA1; GATA1; GATA1; GATA2; GATA2; GATA2; NCOA1; TAL1; TAL1; TAL1; TAL1; ZNF823 (directAnnotation). GATA1; TAL1; TAL1; TAL1; TAL1 (inferredBy_Orthology).
RGCCmetacluster_27.9ZSCAN31 (directAnnotation).
RGCCmetacluster_20.12LHX8; LHX8 (directAnnotation).
RGCCtransfac_pro__M00727NR5A1 (directAnnotation).
RGCCtaipale_tf_pairs__PBX4_HOXA10_NTCGTAAATCA_CAP_reprHOXA10; PBX4 (directAnnotation).
RGCChdpi__ZBTB25ZBTB25 (directAnnotation).
RGCCtransfac_public__M00095CUX1 (directAnnotation).
RGCCmetacluster_143.1ZSCAN31 (directAnnotation).
RGCCtfdimers__MD00210CDX2; HMBOX1 (directAnnotation).
RGCCmetacluster_194.1BARHL1; BARHL2; BARHL2; BARHL2; ZNF354A; ZNF354A (directAnnotation). BARHL1 (inferredBy_Orthology).
RGCCmetacluster_25.2LHX6; LHX6; LHX8 (directAnnotation).
RGCCmetacluster_150.8PAX4; PAX4 (directAnnotation).
RGCCcisbp__M00359PAX3 (directAnnotation).
RGCCdbtfbs__ZNF660_HEK293_ENCSR283DOU_merged_N1ZNF660 (directAnnotation).
RGCCtfdimers__MD00152HOXA13; NKX6-2 (directAnnotation).
RGCCjaspar__MA0707.2MNX1 (directAnnotation).
RGCCmetacluster_20.4DLX1; DLX1; DLX1; DLX2; DLX2; DLX2; DLX2; DLX3; DLX3; DLX3; DLX3; DLX4; DLX4; DLX5; DLX5; DLX5; DLX5; DLX6; DLX6 (directAnnotation).
RGCCtfdimers__MD00328HNF1A; HNF1B; NFYA; NFYB; NFYC (directAnnotation).
RGCCcisbp__M00282PHOX2B (directAnnotation).
RGCCtransfac_pro__M06778ZFP37 (directAnnotation).
RGCCmetacluster_184.31DLX2 (directAnnotation).
RGCCtransfac_pro__M01344CUX1 (directAnnotation).
RGCCtaipale_tf_pairs__HOXB2_RFX5_TAATKRNNNNGCAAC_CAP_reprHOXB2; RFX5 (directAnnotation).
RGCCmetacluster_20.5DLX1; DLX4; DLX4 (directAnnotation).
RGCCjaspar__MA0642.2EN2 (directAnnotation).
RGCCtaipale_cyt_meth__LBX2_CTCGTTAN_eDBD_methLBX2 (directAnnotation).
RGCCmetacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
RGCCmetacluster_77.20SOX1 (inferredBy_Orthology).
RGCCmetacluster_77.14SOX7 (inferredBy_Orthology).
RGCCtaipale_tf_pairs__HOXB2_SOX15_NYMATTANNNNNNACAATR_CAP_reprHOXB2; SOX15 (directAnnotation).
RGCCmetacluster_126.14ZBTB12; ZBTB12 (directAnnotation).
RGCCtransfac_pro__M05403ADNP2 (inferredBy_Orthology).
RGCCtaipale_tf_pairs__FOXO1_HOXA10_RWMAACAYCRTWAA_CAP_reprFOXO1; HOXA10 (directAnnotation).
RGCCmetacluster_161.18DLX6 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."