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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAB22A

Summary for RAB22A

Gene informationGene symbol

RAB22A

Ensembl ID

ENSG00000124209

Entrez ID

57403

Gene nameRAB22A, member RAS oncogene family
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q9UL26


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Dataset with differentially expressed gene: RAB22A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.371523.77e-18

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.2507640.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3678774.90e-36

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3422350.00e+00

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Expression of RAB22A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB22A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

RAB22A

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating RAB22A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB22Ahsa-miR-211-5p99.7885NM_020673
RAB22Ahsa-miR-204-5p99.7885NM_020673
RAB22Ahsa-miR-4755-5p99.547NM_020673
RAB22Ahsa-miR-5006-3p99.547NM_020673
RAB22Ahsa-miR-302e99.1015NM_020673
RAB22Ahsa-miR-20b-5p99.0503NM_020673
RAB22Ahsa-miR-17-5p99.0503NM_020673
RAB22Ahsa-miR-519d-3p99.0503NM_020673
RAB22Ahsa-miR-106a-5p99.0503NM_020673
RAB22Ahsa-miR-106b-5p99.0503NM_020673
RAB22Ahsa-miR-20a-5p99.0503NM_020673
RAB22Ahsa-miR-93-5p99.0503NM_020673
RAB22Ahsa-miR-526b-3p99.0372NM_020673
RAB22Ahsa-miR-520e-3p98.6258NM_020673
RAB22Ahsa-miR-520b-3p98.6258NM_020673
RAB22Ahsa-miR-520a-3p98.6258NM_020673
RAB22Ahsa-miR-520c-3p98.6258NM_020673
RAB22Ahsa-miR-373-3p98.4394NM_020673
RAB22Ahsa-miR-372-3p98.4394NM_020673
RAB22Ahsa-miR-520d-3p98.4394NM_020673
RAB22Ahsa-miR-302b-3p98.4322NM_020673
RAB22Ahsa-miR-302a-3p98.4322NM_020673
RAB22Ahsa-miR-302d-3p98.4322NM_020673
RAB22Ahsa-miR-302c-3p98.4322NM_020673
RAB22Ahsa-miR-449997.0525NM_020673
RAB22Ahsa-miR-5580-3p96.2682NM_020673
RAB22Ahsa-miR-548ar-3p95.7965NM_020673
RAB22Ahsa-miR-548a-3p95.5787NM_020673
RAB22Ahsa-miR-548f-3p95.5712NM_020673
RAB22Ahsa-miR-556-3p95.1037NM_020673
RAB22Ahsa-miR-579-3p94.9416NM_020673
RAB22Ahsa-miR-548e-3p94.7647NM_020673
RAB22Ahsa-miR-548az-3p94.7647NM_020673
RAB22Ahsa-miR-548bc94.7647NM_020673
RAB22Ahsa-miR-4446-5p94.2647NM_020673
RAB22Ahsa-miR-664b-3p93.8803NM_020673
RAB22Ahsa-miR-50793.4179NM_020673
RAB22Ahsa-miR-1910-5p92.9562NM_020673
RAB22Ahsa-miR-548az-5p92.901NM_020673
RAB22Ahsa-miR-548t-5p92.901NM_020673
RAB22Ahsa-miR-6832-3p92.0947NM_020673
RAB22Ahsa-miR-55791.5718NM_020673
RAB22Ahsa-miR-449491.1731NM_020673
RAB22Ahsa-miR-3529-3p89.8841NM_020673
RAB22Ahsa-miR-4766-5p89.3267NM_020673
RAB22Ahsa-miR-223-5p88.8589NM_020673
RAB22Ahsa-miR-205388.0505NM_020673
RAB22Ahsa-miR-627-3p86.695NM_020673
RAB22Ahsa-miR-520g-3p86.6458NM_020673
RAB22Ahsa-miR-520h86.6458NM_020673
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Motifs and transcription factors (TFs) regulating RAB22A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAB22Akznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
RAB22Ametacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
RAB22Ametacluster_3.14WT1; WT1 (directAnnotation).
RAB22Acisbp__M07938E2F1 (directAnnotation).
RAB22Atransfac_pro__M04617ZBTB7A (directAnnotation).
RAB22Ametacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
RAB22Akznf__ZNF529_Imbeault2017_RP_ChIP-seqZNF529 (directAnnotation).
RAB22Ataipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
RAB22Ataipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
RAB22Atransfac_pro__M07387ZBTB7A (directAnnotation).
RAB22Atransfac_pro__M07436WT1 (directAnnotation).
RAB22Atransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
RAB22Atransfac_pro__M00716ZBTB14 (directAnnotation).
RAB22Aswissregulon__hs__CHD1CHD1 (directAnnotation).
RAB22Ahdpi__HIP2UBE2K (directAnnotation).
RAB22Ataipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
RAB22Ametacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
RAB22Atransfac_pro__M04893TAF1 (directAnnotation).
RAB22Atransfac_pro__M03876ZBTB33 (directAnnotation).
RAB22Ametacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
RAB22Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RAB22Akznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
RAB22Atransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RAB22Ametacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
RAB22Ametacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
RAB22Aswissregulon__hs__ELF2ELF2 (directAnnotation).
RAB22Ataipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
RAB22Acisbp__M02645ETS1 (directAnnotation).
RAB22Acisbp__M08198ELF1 (directAnnotation).
RAB22Ataipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
RAB22Ataipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
RAB22Ataipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
RAB22Ataipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
RAB22Atransfac_pro__M06331ZNF343 (directAnnotation).
RAB22Ametacluster_144.3ZNF704; ZNF704 (directAnnotation).
RAB22Ametacluster_7.13ZFX (directAnnotation).
RAB22Akznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RAB22Acisbp__M00968MTF2 (directAnnotation).
RAB22Ametacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RAB22Ametacluster_160.20JUND; PRDM15 (directAnnotation).
RAB22Ametacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
RAB22Ametacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RAB22Acisbp__M00788ZFY (inferredBy_Orthology).
RAB22Akznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
RAB22Ametacluster_175.1ZNF283 (directAnnotation).
RAB22Ahdpi__ZNF304ZNF304 (directAnnotation).
RAB22Atransfac_pro__M02844BCL6B (inferredBy_Orthology).
RAB22Atransfac_pro__M01199TRIM28 (directAnnotation).
RAB22Akznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
RAB22Ametacluster_151.2ZNF23 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."