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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: RAB11A

Summary for RAB11A

Gene informationGene symbol

RAB11A

Ensembl ID

ENSG00000103769

Entrez ID

8766

Gene nameRAB11A, member RAS oncogene family
SynonymsYL8
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RAB11A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.3711637.97e-20

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.2510089.99e-05

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2588861.11e-11

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.4774494.08e-28

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2533621.40e-45

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3522996.24e-18

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.4175732.93e-16

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2717772.01e-08

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.6127130.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5628840.00e+00

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Expression of RAB11A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB11A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAB11A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB11Ahsa-miR-524-5p99.4827NM_001206836
RAB11Ahsa-miR-520d-5p99.4827NM_001206836
RAB11Ahsa-miR-551b-5p97.5811NM_001206836
RAB11Ahsa-miR-548av-5p95.7414NM_004663
RAB11Ahsa-miR-805495.7414NM_004663
RAB11Ahsa-miR-548k95.7414NM_004663
RAB11Ahsa-miR-4768-3p95.6863NM_004663
RAB11Ahsa-miR-373-5p95.2606NM_001206836
RAB11Ahsa-miR-616-5p95.2606NM_001206836
RAB11Ahsa-miR-371b-5p95.2606NM_001206836
RAB11Ahsa-miR-532-5p94.8075NM_001206836
RAB11Ahsa-miR-153-5p93.9164NM_001206836
RAB11Ahsa-miR-19893.7243NM_001206836
RAB11Ahsa-miR-450b-5p93.4253NM_004663
RAB11Ahsa-miR-4802-3p93.3518NM_001206836
RAB11Ahsa-miR-340-5p91.5753NM_001206836
RAB11Ahsa-miR-17-3p91.3144NM_001206836
RAB11Ahsa-miR-314891.1451NM_004663
RAB11Ahsa-miR-426390.4457NM_004663
RAB11Ahsa-miR-391089.2859NM_004663
RAB11Ahsa-miR-302e88.9744NM_001206836
RAB11Ahsa-miR-520a-3p87.9384NM_001206836
RAB11Ahsa-miR-452687.8238NM_001206836
RAB11Ahsa-miR-366087.8238NM_001206836
RAB11Ahsa-miR-428787.395NM_004663
RAB11Ahsa-miR-4685-3p87.395NM_004663
RAB11Ahsa-miR-4703-5p87.238NM_001206836
RAB11Ahsa-miR-127986.5402NM_004663
RAB11Ahsa-miR-520b-3p86.395NM_001206836
RAB11Ahsa-miR-520e-3p86.395NM_001206836
RAB11Ahsa-miR-520d-3p86.395NM_001206836
RAB11Ahsa-miR-372-3p86.395NM_001206836
RAB11Ahsa-miR-373-3p86.395NM_001206836
RAB11Ahsa-miR-520c-3p86.395NM_001206836
RAB11Ahsa-miR-442486.1819NM_004663
RAB11Ahsa-miR-2467-5p86.113NM_004663
RAB11Ahsa-miR-520f-3p85.8461NM_001206836
RAB11Ahsa-miR-3942-5p85.7743NM_001206836
RAB11Ahsa-miR-1250-3p85.6214NM_001206836
RAB11Ahsa-miR-4760-3p85.5987NM_004663
RAB11Ahsa-miR-302d-3p85.4773NM_001206836
RAB11Ahsa-miR-302c-3p85.4773NM_001206836
RAB11Ahsa-miR-302b-3p85.4773NM_001206836
RAB11Ahsa-miR-302a-3p85.4773NM_001206836
RAB11Ahsa-miR-5579-5p85.4011NM_004663
RAB11Ahsa-miR-10397-3p85.2334NM_004663
RAB11Ahsa-miR-95-5p85.0759NM_001206836
RAB11Ahsa-miR-316384.4377NM_001206836
RAB11Ahsa-miR-4709-3p84.2408NM_004663
RAB11Ahsa-miR-6501-3p84.177NM_004663
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Motifs and transcription factors (TFs) regulating RAB11A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAB11Ametacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
RAB11Ataipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
RAB11Ametacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RAB11Ataipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
RAB11Ametacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RAB11Aswissregulon__hs__ELF2ELF2 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
RAB11Ahdpi__ETV4ETV4 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
RAB11Ataipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
RAB11Acisbp__M02645ETS1 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
RAB11Ataipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
RAB11Ametacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
RAB11Ataipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
RAB11Ataipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
RAB11Ajaspar__MA1483.2ELF2 (directAnnotation).
RAB11Ataipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
RAB11Ataipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
RAB11Ataipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
RAB11Ataipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
RAB11Ataipale_tf_pairs__HOXB2_ELF1_SMGGAAGTMRTTA_CAPELF1; HOXB2 (directAnnotation).
RAB11Acisbp__M08198ELF1 (directAnnotation).
RAB11Ataipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
RAB11Ahdpi__TP73TP73 (directAnnotation).
RAB11Ataipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
RAB11Ahdpi__FLI1FLI1 (directAnnotation).
RAB11Ametacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RAB11Ajaspar__MA1957.1ELK1 (directAnnotation).
RAB11Ametacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
RAB11Ataipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
RAB11Ataipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
RAB11Atransfac_pro__M04826EP300 (directAnnotation).
RAB11Ataipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
RAB11Ajaspar__MA1708.1ETV7 (directAnnotation).
RAB11Ataipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAPERG; TEAD4 (directAnnotation).
RAB11Ataipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
RAB11Ataipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
RAB11Ataipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
RAB11Ataipale_tf_pairs__ERF_FOXI1_TGTTKMCGGAWRN_CAP_reprERF; FOXI1 (directAnnotation).
RAB11Ametacluster_135.11NR2C2 (directAnnotation).
RAB11Akznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RAB11Ametacluster_160.20JUND; PRDM15 (directAnnotation).
RAB11Ajaspar__MA0185.1DEAF1 (inferredBy_Orthology).
RAB11Ametacluster_61.1DEAF1; DEAF1 (directAnnotation).
RAB11Acisbp__M00788ZFY (inferredBy_Orthology).
RAB11Ahdpi__ZNF304ZNF304 (directAnnotation).
RAB11Atransfac_pro__M02844BCL6B (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
RAB11A"5'-Guanosine-Diphosphate-Monothiophosphate"

DB01864

small molecule
RAB11A"Guanosine-5'-Diphosphate"

DB04315

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."