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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PPP4R3A

Summary for PPP4R3A

Gene informationGene symbol

PPP4R3A

Ensembl ID

ENSG00000100796

Entrez ID

55671

Gene nameprotein phosphatase 4 regulatory subunit 3A
SynonymsFLFL1|FLJ20707|KIAA2010|MSTP033|PP4R3|SMEK1|smk-1|smk1
Gene typeprotein_coding
UniProtAcc

Q6IN85


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Dataset with differentially expressed gene: PPP4R3A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2668660.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3092465.82e-11

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.265571.96e-09

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.4089880.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4171590.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3469320.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3017870.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.5262060.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2590466.48e-07

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Expression of PPP4R3A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPP4R3A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPP4R3A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPP4R3Ahsa-miR-431999.0159NM_001284280
PPP4R3Ahsa-miR-125b-5p98.8242NM_001284280
PPP4R3Ahsa-miR-125a-5p98.8242NM_001284280
PPP4R3Ahsa-miR-3613-3p97.9649NM_001284281
PPP4R3Ahsa-miR-345-3p97.9261NM_001284280
PPP4R3Ahsa-miR-6825-5p97.7031NM_001284281
PPP4R3Ahsa-miR-3140-3p97.326NM_001284281
PPP4R3Ahsa-miR-670-5p96.8441NM_001284280
PPP4R3Ahsa-miR-1271-5p95.7048NM_001284280
PPP4R3Ahsa-miR-96-5p95.7048NM_001284280
PPP4R3Ahsa-miR-1213395.7048NM_001284280
PPP4R3Ahsa-miR-4732-3p95.3044NM_001284280
PPP4R3Ahsa-miR-316394.3368NM_001284280
PPP4R3Ahsa-miR-7-2-3p93.7861NM_001284280
PPP4R3Ahsa-miR-7-1-3p93.7861NM_001284280
PPP4R3Ahsa-miR-10522-5p93.631NM_001284280
PPP4R3Ahsa-miR-548aj-3p93.3969NM_001284280
PPP4R3Ahsa-miR-548x-3p93.3969NM_001284280
PPP4R3Ahsa-miR-17-3p93.0876NM_001284280
PPP4R3Ahsa-miR-6887-3p92.9041NM_001284280
PPP4R3Ahsa-miR-807592.4075NM_001284281
PPP4R3Ahsa-miR-6864-5p92.1765NM_001284280
PPP4R3Ahsa-miR-6826-3p92.0658NM_001284280
PPP4R3Ahsa-miR-314991.7379NM_001284281
PPP4R3Ahsa-miR-513b-5p91.1252NM_001284280
PPP4R3Ahsa-miR-6822-5p91.0488NM_001284281
PPP4R3Ahsa-miR-6750-5p91.0488NM_001284281
PPP4R3Ahsa-miR-675-3p90.8162NM_001284281
PPP4R3Ahsa-miR-317990.5586NM_001284280
PPP4R3Ahsa-miR-751590.5586NM_001284280
PPP4R3Ahsa-miR-548aq-3p90.5427NM_001284280
PPP4R3Ahsa-miR-548ae-3p90.5427NM_001284280
PPP4R3Ahsa-miR-548j-3p90.5427NM_001284280
PPP4R3Ahsa-miR-548am-3p90.5427NM_001284280
PPP4R3Ahsa-miR-548ah-3p90.5427NM_001284280
PPP4R3Ahsa-miR-6734-3p90.5352NM_001284281
PPP4R3Ahsa-miR-551b-5p90.1193NM_001284280
PPP4R3Ahsa-miR-95-5p89.8958NM_001284280
PPP4R3Ahsa-miR-428689.811NM_001284281
PPP4R3Ahsa-miR-425-5p89.6221NM_001284281
PPP4R3Ahsa-miR-29888.9637NM_001284280
PPP4R3Ahsa-miR-10394-5p88.9611NM_001284280
PPP4R3Ahsa-miR-120588.9611NM_001284280
PPP4R3Ahsa-miR-6505-5p88.4172NM_001284280
PPP4R3Ahsa-miR-138-2-3p87.0663NM_001284280
PPP4R3Ahsa-miR-446886.9953NM_001284281
PPP4R3Ahsa-miR-371a-5p86.8493NM_001284281
PPP4R3Ahsa-miR-590-3p86.592NM_001284281
PPP4R3Ahsa-miR-548c-3p86.3561NM_001284280
PPP4R3Ahsa-miR-569786.2885NM_001284281
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Motifs and transcription factors (TFs) regulating PPP4R3A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPP4R3Atransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
PPP4R3Atransfac_pro__M04916TAF1 (directAnnotation).
PPP4R3Ametacluster_135.11NR2C2 (directAnnotation).
PPP4R3Ametacluster_144.3ZNF704; ZNF704 (directAnnotation).
PPP4R3Akznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PPP4R3Acisbp__M00968MTF2 (directAnnotation).
PPP4R3Ametacluster_198.3ZFP64 (directAnnotation).
PPP4R3Ametacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PPP4R3Ametacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PPP4R3Ajaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PPP4R3Ametacluster_61.1DEAF1; DEAF1 (directAnnotation).
PPP4R3Akznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PPP4R3Ametacluster_175.1ZNF283 (directAnnotation).
PPP4R3Ametacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
PPP4R3Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PPP4R3Atransfac_pro__M01199TRIM28 (directAnnotation).
PPP4R3Akznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
PPP4R3Ametacluster_151.2ZNF23 (directAnnotation).
PPP4R3Atransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PPP4R3Atransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PPP4R3Atransfac_pro__M03806ZBTB7C (directAnnotation).
PPP4R3Atransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
PPP4R3Ametacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
PPP4R3Ajaspar__MA0748.2YY2 (directAnnotation).
PPP4R3Atransfac_pro__M01090SMAD9 (inferredBy_Orthology).
PPP4R3Atransfac_pro__M01088DEAF1 (inferredBy_Orthology).
PPP4R3Aflyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
PPP4R3Atransfac_pro__M00430E2F1 (directAnnotation).
PPP4R3Ametacluster_126.3LIN28B; LIN28B (directAnnotation).
PPP4R3Atransfac_pro__M04893TAF1 (directAnnotation).
PPP4R3Ahomer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
PPP4R3Atransfac_pro__M02865GMEB1 (inferredBy_Orthology).
PPP4R3Atransfac_pro__M08894OVOL1; OVOL2 (directAnnotation).
PPP4R3Ahdpi__HIP2UBE2K (directAnnotation).
PPP4R3Akznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
PPP4R3Atransfac_pro__M01238DEAF1 (inferredBy_Orthology).
PPP4R3Ataipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
PPP4R3Adbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
PPP4R3Ahdpi__RARARARA (directAnnotation).
PPP4R3Ataipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
PPP4R3Ataipale_tf_pairs__TFAP2C_DLX3_NSCCNNNRGGCANNNNNNTAATKR_CAP_reprDLX3; TFAP2C (directAnnotation).
PPP4R3Ajaspar__MA1583.1ZFP57 (directAnnotation).
PPP4R3Atransfac_pro__M02898SMAD3 (directAnnotation).
PPP4R3Ajaspar__MA1721.1ZNF93 (directAnnotation).
PPP4R3Ajaspar__MA1122.1TFDP1 (directAnnotation).
PPP4R3Atransfac_pro__M07310SP5 (directAnnotation).
PPP4R3Ataipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PPP4R3Akznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
PPP4R3Ataipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PPP4R3Acisbp__M00249WT1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."