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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: JMJD1C

Summary for JMJD1C

Gene informationGene symbol

JMJD1C

Ensembl ID

ENSG00000171988

Entrez ID

221037

Gene namejumonji domain containing 1C
SynonymsDKFZp761F0118|FLJ14374|KDM3C|KIAA1380|TRIP8
Gene typeprotein_coding
UniProtAcc

Q15652


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Dataset with differentially expressed gene: JMJD1C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.6167650.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.310162.10e-44

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.4708430.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.6946340.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.6631629.81e-45

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.2865240.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.5533240.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.3747421.86e-16

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.3855530.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreCD8+ T cells-0.2592039.29e-13

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3868110.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3287583.05e-38

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3206550.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.6203070.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.9406992.68e-37

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Expression of JMJD1C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to JMJD1C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating JMJD1C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
JMJD1Chsa-miR-3065-5p99.4734NM_001318153
JMJD1Chsa-miR-7159-5p99.0791NM_001318153
JMJD1Chsa-miR-2681-5p98.9272NM_001318153
JMJD1Chsa-miR-96-5p98.6831NM_001282948
JMJD1Chsa-miR-1271-5p97.8128NM_001282948
JMJD1Chsa-miR-1213397.8128NM_001282948
JMJD1Chsa-let-7c-3p97.6488NM_001282948
JMJD1Chsa-miR-590-3p95.8459NM_001318153
JMJD1Chsa-miR-607395.6051NM_001282948
JMJD1Chsa-miR-3688-3p94.0899NM_001318153
JMJD1Chsa-miR-6507-3p94.0379NM_001318153
JMJD1Chsa-miR-430793.212NM_001318153
JMJD1Chsa-miR-190a-3p93.0796NM_001282948
JMJD1Chsa-miR-3606-5p92.4852NM_001282948
JMJD1Chsa-let-7a-2-3p92.2133NM_001282948
JMJD1Chsa-miR-138-5p91.6715NM_001282948
JMJD1Chsa-miR-806991.3836NM_001318153
JMJD1Chsa-let-7g-3p90.8506NM_001282948
JMJD1Chsa-miR-499b-3p89.9341NM_001318153
JMJD1Chsa-miR-499a-3p89.9341NM_001318153
JMJD1Chsa-miR-182-5p89.2899NM_001282948
JMJD1Chsa-miR-376c-3p89.282NM_001318153
JMJD1Chsa-miR-797889.0537NM_001282948
JMJD1Chsa-miR-548g-3p88.957NM_001282948
JMJD1Chsa-miR-338-5p88.615NM_001282948
JMJD1Chsa-miR-4762-3p88.5188NM_001318153
JMJD1Chsa-miR-142-3p88.4319NM_001282948
JMJD1Chsa-miR-392487.5165NM_001318153
JMJD1Chsa-miR-208a-5p87.5141NM_001282948
JMJD1Chsa-miR-208b-5p87.5141NM_001282948
JMJD1Chsa-miR-512-3p85.4182NM_001282948
JMJD1Chsa-miR-5588-5p83.9014NM_001318153
JMJD1Chsa-miR-4720-5p83.9014NM_001318153
JMJD1Chsa-miR-4799-3p83.9014NM_001318153
JMJD1Chsa-miR-33a-3p83.7645NM_001318153
JMJD1Chsa-miR-432583.3417NM_001318153
JMJD1Chsa-miR-379-3p82.7394NM_001318153
JMJD1Chsa-miR-411-3p82.7394NM_001318153
JMJD1Chsa-miR-369-3p82.6636NM_001282948
JMJD1Chsa-miR-4524a-3p82.2794NM_001318153
JMJD1Chsa-miR-4742-5p82.1308NM_001282948
JMJD1Chsa-miR-302d-5p81.7937NM_001318153
JMJD1Chsa-miR-302b-5p81.7937NM_001318153
JMJD1Chsa-miR-7852-3p81.6321NM_001282948
JMJD1Chsa-miR-568981.1254NM_001282948
JMJD1Chsa-miR-1252-3p80.7428NM_001318153
JMJD1Chsa-miR-23a-3p80.5374NM_001282948
JMJD1Chsa-miR-23b-3p80.5374NM_001282948
JMJD1Chsa-miR-23c80.5374NM_001282948
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Motifs and transcription factors (TFs) regulating JMJD1C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
JMJD1Ctaipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
JMJD1Ctaipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
JMJD1Cmetacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
JMJD1Ctransfac_pro__M06035ZNF749 (directAnnotation).
JMJD1Ctaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
JMJD1Ckznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
JMJD1Ctransfac_pro__M05788ZNF569 (inferredBy_Orthology).
JMJD1Ctaipale_tf_pairs__ATF4_CEBPB_NNATGAYGCAAYN_CAPATF4; CEBPB (directAnnotation).
JMJD1Cjaspar__MA1596.1ZNF460 (directAnnotation).
JMJD1Cmetacluster_52.11ZNF184 (directAnnotation).
JMJD1Cmetacluster_7.8ZBTB7A; ZNF28 (directAnnotation).
JMJD1Cmetacluster_35.7HINFP (inferredBy_Orthology).
JMJD1Cmetacluster_98.1ZNF524 (directAnnotation).
JMJD1Ctaipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNNYWTTGT_CAP_reprETV2; SOX15 (directAnnotation).
JMJD1Ckznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
JMJD1Ctaipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
JMJD1Cmetacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
JMJD1Cmetacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
JMJD1Cmetacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
JMJD1Ctransfac_pro__M01783SP2 (directAnnotation).
JMJD1Cmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
JMJD1Cmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
JMJD1Ccisbp__M00341PAX6 (directAnnotation).
JMJD1Ckznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
JMJD1Cmetacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
JMJD1Ctransfac_pro__M01253CNOT3 (directAnnotation).
JMJD1Chomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
JMJD1Cmetacluster_7.13ZFX (directAnnotation).
JMJD1Cjaspar__MA0604.1ATF1 (inferredBy_Orthology).
JMJD1Ccisbp__M00968MTF2 (directAnnotation).
JMJD1Ctransfac_pro__M04817ZBTB33 (directAnnotation).
JMJD1Ctaipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
JMJD1Ctransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
JMJD1Ctransfac_pro__M02089E2F3 (directAnnotation).
JMJD1Cdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
JMJD1Cjaspar__MA0748.2YY2 (directAnnotation).
JMJD1Cdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
JMJD1Ctaipale_tf_pairs__ERF_PITX1_NSCGGANNNNNNGGMTTA_CAPERF; PITX1 (directAnnotation).
JMJD1Ckznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
JMJD1Cmetacluster_22.37BACH1 (directAnnotation).
JMJD1Cmetacluster_22.35MAFK (directAnnotation).
JMJD1Cjaspar__MA1125.1ZNF384 (directAnnotation).
JMJD1Ckznf__CTCF_Rhee2011.2_ChIP-exoCTCF (directAnnotation).
JMJD1Ckznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
JMJD1Cmetacluster_22.39NFE2L2 (directAnnotation).
JMJD1Cmetacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
JMJD1Ctfdimers__MD00276IRF1; STAT6 (directAnnotation).
JMJD1Cmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
JMJD1Ctransfac_pro__M04916TAF1 (directAnnotation).
JMJD1Cmetacluster_135.11NR2C2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."