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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ITGA6

Summary for ITGA6

Gene informationGene symbol

ITGA6

Ensembl ID

ENSG00000091409

Entrez ID

3655

Gene nameintegrin subunit alpha 6
SynonymsCD49f
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: ITGA6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8016455.61e-03

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.410672.04e-22

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3809218.78e-20

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.3273235.08e-06

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.286180.00e+00

GSE149214

PC9 cell lineCell lineLung cancerEGFR-mutated non-small cell lung cancer (NSCLC)Targeted therapyerlotinibNAMalignant cells-0.4419490.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.4215730.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4391841.46e-21

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Expression of ITGA6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ITGA6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ITGA6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ITGA6hsa-let-7b-3p99.3503NM_000210
ITGA6hsa-let-7a-3p99.3503NM_000210
ITGA6hsa-miR-98-3p99.3503NM_000210
ITGA6hsa-let-7f-1-3p99.3503NM_000210
ITGA6hsa-miR-141-3p97.9496NM_001316306
ITGA6hsa-miR-200a-3p97.9496NM_001316306
ITGA6hsa-miR-590-3p96.9103NM_001079818
ITGA6hsa-miR-3140-5p96.862NM_000210
ITGA6hsa-miR-6516-5p95.8791NM_001079818
ITGA6hsa-miR-30e-5p95.7389NM_000210
ITGA6hsa-miR-30d-5p95.7389NM_000210
ITGA6hsa-miR-30c-5p95.7389NM_000210
ITGA6hsa-miR-30a-5p95.7389NM_000210
ITGA6hsa-miR-30b-5p95.7389NM_000210
ITGA6hsa-miR-472994.7444NM_001079818
ITGA6hsa-miR-186-5p94.5227NM_000210
ITGA6hsa-miR-92a-3p94.1227NM_000210
ITGA6hsa-miR-32-5p94.1227NM_000210
ITGA6hsa-miR-92b-3p94.1227NM_000210
ITGA6hsa-miR-367-3p94.0623NM_000210
ITGA6hsa-miR-363-3p94.0623NM_000210
ITGA6hsa-miR-25-3p94.0623NM_000210
ITGA6hsa-miR-129792.51NM_000210
ITGA6hsa-miR-5692a91.8362NM_001079818
ITGA6hsa-miR-19b-3p91.7607NM_000210
ITGA6hsa-miR-19a-3p91.7607NM_000210
ITGA6hsa-miR-684491.4573NM_000210
ITGA6hsa-miR-105-5p91.3633NM_001079818
ITGA6hsa-miR-313390.5805NM_000210
ITGA6hsa-miR-6793-3p90.4551NM_001079818
ITGA6hsa-miR-9-5p89.8518NM_000210
ITGA6hsa-miR-6760-3p89.5422NM_000210
ITGA6hsa-miR-216b-3p89.0602NM_001079818
ITGA6hsa-miR-477588.7626NM_001079818
ITGA6hsa-miR-126788.3041NM_001079818
ITGA6hsa-miR-323b-5p88.2592NM_001079818
ITGA6hsa-miR-410-5p88.2592NM_001079818
ITGA6hsa-miR-494-5p88.2592NM_001079818
ITGA6hsa-miR-4762-3p88.0363NM_000210
ITGA6hsa-miR-222-5p87.9785NM_000210
ITGA6hsa-miR-26a-5p87.9636NM_000210
ITGA6hsa-miR-26b-5p87.9636NM_000210
ITGA6hsa-miR-117986.6635NM_000210
ITGA6hsa-miR-381-3p86.1793NM_001079818
ITGA6hsa-miR-30086.1793NM_001079818
ITGA6hsa-miR-508786.0249NM_001079818
ITGA6hsa-miR-4666a-3p85.8822NM_001079818
ITGA6hsa-miR-335-3p85.8809NM_000210
ITGA6hsa-miR-568285.6742NM_000210
ITGA6hsa-miR-340-5p85.312NM_001079818
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Motifs and transcription factors (TFs) regulating ITGA6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ITGA6metacluster_151.2ZNF23 (directAnnotation).
ITGA6metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
ITGA6kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
ITGA6metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ITGA6transfac_pro__M06071ZNF814 (directAnnotation).
ITGA6transfac_pro__M05628ZNF735 (directAnnotation).
ITGA6homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
ITGA6metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
ITGA6taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
ITGA6jaspar__MA0079.5SP1 (directAnnotation).
ITGA6kznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
ITGA6metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
ITGA6kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
ITGA6transfac_pro__M04617ZBTB7A (directAnnotation).
ITGA6metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ITGA6taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ITGA6taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
ITGA6transfac_pro__M07387ZBTB7A (directAnnotation).
ITGA6transfac_pro__M07436WT1 (directAnnotation).
ITGA6transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ITGA6transfac_pro__M00716ZBTB14 (directAnnotation).
ITGA6swissregulon__hs__CHD1CHD1 (directAnnotation).
ITGA6hdpi__HIP2UBE2K (directAnnotation).
ITGA6taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ITGA6transfac_pro__M04893TAF1 (directAnnotation).
ITGA6transfac_pro__M03876ZBTB33 (directAnnotation).
ITGA6metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ITGA6metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ITGA6kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
ITGA6transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ITGA6metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ITGA6metacluster_50.1BATF; BATF; BATF; BATF; BNC2; FOS; FOSB; FOSL1; FOSL1; IRF4; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMAD2; SMAD3 (directAnnotation). BATF; BATF; BATF; FOS; FOSL1; FOSL2; JDP2; JUN; JUN; JUND (inferredBy_Orthology).
ITGA6taipale_tf_pairs__TEAD4_HOXB13_CTCGTAAAATGYN_CAP_reprHOXB13; TEAD4 (directAnnotation).
ITGA6transfac_pro__M05483ZBTB1 (directAnnotation).
ITGA6transfac_pro__M05852ZNF689 (directAnnotation).
ITGA6transfac_pro__M04856BATF (directAnnotation).
ITGA6transfac_pro__M06314ZNF239 (directAnnotation).
ITGA6dbtfbs__SETDB1_HEK293_ENCSR348AGV_merged_N1SETDB1 (directAnnotation).
ITGA6swissregulon__hs__DBPDBP (directAnnotation).
ITGA6taipale_tf_pairs__GCM2_ONECUT2_RTRCGGGNNNNNNATCRATN_CAP_reprGCM2; ONECUT2 (directAnnotation).
ITGA6transfac_pro__M06035ZNF749 (directAnnotation).
ITGA6metacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
ITGA6metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
ITGA6metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
ITGA6transfac_public__M00024E2F1 (directAnnotation).
ITGA6transfac_pro__M04950EGR1 (directAnnotation).
ITGA6taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
ITGA6metacluster_135.11NR2C2 (directAnnotation).
ITGA6kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ITGA6cisbp__M00968MTF2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."