DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: GPBP1

Summary for GPBP1

Gene informationGene symbol

GPBP1

Ensembl ID

ENSG00000062194

Entrez ID

65056

Gene nameGC-rich promoter binding protein 1
SynonymsDKFZp761C169
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: GPBP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.2931121.16e-21

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.3085154.55e-05

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.4167373.34e-42

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.4082140.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.366070.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3056350.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.2521071.28e-22

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-0.7185789.27e-03

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.2662950.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4759021.65e-15

Top

Expression of GPBP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to GPBP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating GPBP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GPBP1hsa-miR-569698.7182NM_022913
GPBP1hsa-miR-320c98.1113NM_001203246
GPBP1hsa-miR-442998.1113NM_001203246
GPBP1hsa-miR-320b98.1113NM_001203246
GPBP1hsa-miR-320a-3p98.1113NM_001203246
GPBP1hsa-miR-320d98.1113NM_001203246
GPBP1hsa-miR-3529-3p97.9136NM_022913
GPBP1hsa-miR-808697.2062NM_022913
GPBP1hsa-miR-4766-5p96.9122NM_001203246
GPBP1hsa-miR-10527-5p96.404NM_001203246
GPBP1hsa-miR-9-3p95.9524NM_001203246
GPBP1hsa-miR-6802-3p94.9324NM_001203246
GPBP1hsa-miR-548p94.4737NM_022913
GPBP1hsa-miR-450493.7781NM_022913
GPBP1hsa-miR-524-5p93.5364NM_022913
GPBP1hsa-miR-520d-5p93.5364NM_022913
GPBP1hsa-miR-426293.0707NM_022913
GPBP1hsa-miR-58792.9701NM_001203246
GPBP1hsa-miR-877-3p92.8157NM_001203246
GPBP1hsa-miR-54392.3998NM_022913
GPBP1hsa-miR-474492.2305NM_001203246
GPBP1hsa-miR-127691.1512NM_001203246
GPBP1hsa-miR-4795-3p91.0729NM_022913
GPBP1hsa-miR-181b-5p90.4221NM_022913
GPBP1hsa-miR-181d-5p90.4221NM_022913
GPBP1hsa-miR-181a-5p90.4221NM_022913
GPBP1hsa-miR-181c-5p90.4221NM_022913
GPBP1hsa-miR-133a-5p89.5961NM_022913
GPBP1hsa-miR-664b-3p89.5627NM_022913
GPBP1hsa-miR-579-3p89.5627NM_022913
GPBP1hsa-miR-3613-3p89.0689NM_022913
GPBP1hsa-miR-155-3p89.0585NM_001203246
GPBP1hsa-miR-449c-3p88.9976NM_022913
GPBP1hsa-miR-3065-5p87.5041NM_022913
GPBP1hsa-miR-1252-3p86.9439NM_022913
GPBP1hsa-miR-472986.6937NM_022913
GPBP1hsa-miR-368586.1701NM_001203246
GPBP1hsa-miR-126-5p86.0218NM_022913
GPBP1hsa-miR-568585.4125NM_022913
GPBP1hsa-miR-4690-3p85.4125NM_022913
GPBP1hsa-miR-6719-3p85.3955NM_001203246
GPBP1hsa-miR-2276-3p84.8355NM_001203246
GPBP1hsa-miR-5584-3p84.6529NM_022913
GPBP1hsa-miR-222-3p84.4797NM_001203246
GPBP1hsa-miR-221-3p84.4797NM_001203246
GPBP1hsa-miR-4671-3p84.1528NM_001203246
GPBP1hsa-miR-4712-3p83.638NM_022913
GPBP1hsa-miR-627-3p83.3232NM_022913
GPBP1hsa-miR-467282.8229NM_022913
GPBP1hsa-miR-374a-3p82.3412NM_001203246
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating GPBP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GPBP1transfac_public__M00039CREB1 (directAnnotation).
GPBP1jaspar__MA0604.1ATF1 (inferredBy_Orthology).
GPBP1cisbp__M04023CREB1 (directAnnotation).
GPBP1transfac_pro__M00691ATF1 (directAnnotation).
GPBP1jaspar__MA0039.4KLF4 (directAnnotation).
GPBP1transfac_pro__M04746E2F1 (directAnnotation).
GPBP1metacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
GPBP1tfdimers__MD00457SREBF1; SREBF2; ZNF354C (directAnnotation).
GPBP1transfac_pro__M04595SALL2 (directAnnotation).
GPBP1jaspar__MA1117.1RELB (directAnnotation).
GPBP1transfac_pro__M08803CREM (directAnnotation).
GPBP1metacluster_135.11NR2C2 (directAnnotation).
GPBP1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
GPBP1tfdimers__MD00038TFAP2C (directAnnotation).
GPBP1metacluster_7.13ZFX (directAnnotation).
GPBP1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
GPBP1cisbp__M00968MTF2 (directAnnotation).
GPBP1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GPBP1metacluster_160.20JUND; PRDM15 (directAnnotation).
GPBP1cisbp__M00341PAX6 (directAnnotation).
GPBP1metacluster_198.3ZFP64 (directAnnotation).
GPBP1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
GPBP1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
GPBP1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
GPBP1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
GPBP1cisbp__M00788ZFY (inferredBy_Orthology).
GPBP1metacluster_175.1ZNF283 (directAnnotation).
GPBP1hdpi__ZNF304ZNF304 (directAnnotation).
GPBP1transfac_pro__M02844BCL6B (inferredBy_Orthology).
GPBP1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
GPBP1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GPBP1transfac_pro__M01199TRIM28 (directAnnotation).
GPBP1kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
GPBP1metacluster_151.2ZNF23 (directAnnotation).
GPBP1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
GPBP1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
GPBP1transfac_pro__M03806ZBTB7C (directAnnotation).
GPBP1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
GPBP1transfac_pro__M02913SP140 (inferredBy_Orthology).
GPBP1transfac_pro__M01090SMAD9 (inferredBy_Orthology).
GPBP1transfac_pro__M01088DEAF1 (inferredBy_Orthology).
GPBP1flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
GPBP1transfac_pro__M00430E2F1 (directAnnotation).
GPBP1metacluster_126.3LIN28B; LIN28B (directAnnotation).
GPBP1transfac_pro__M04893TAF1 (directAnnotation).
GPBP1homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
GPBP1hdpi__TP73TP73 (directAnnotation).
GPBP1transfac_pro__M02865GMEB1 (inferredBy_Orthology).
GPBP1hdpi__HIP2UBE2K (directAnnotation).
GPBP1taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
Page: 1 2 3 4

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."