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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FUS

Summary for FUS

Gene informationGene symbol

FUS

Ensembl ID

ENSG00000089280

Entrez ID

2521

Gene nameFUS RNA binding protein
SynonymsALS6|FUS1|hnRNP-P2|HNRNPP2|TLS
Gene typeprotein_coding
UniProtAcc

P35637


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Dataset with differentially expressed gene: FUS

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.239992.46e-07

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4636647.20e-40

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.3066329.13e-17

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.3525660.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.2779762.01e-37

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3725520.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.3156040.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.3205161.66e-22

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD4+ T cells0.3363668.41e-45

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.3708182.90e-08

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.3163850.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.262954.14e-02

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.313511.27e-28

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells-0.2707174.61e-27

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreCD4+ T cells0.2726640.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNANK cells0.4593651.17e-03

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.4000374.13e-14

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.7745720.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.562510.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.5621480.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpostNK cells-0.3226392.77e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.8994390.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.9262170.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.7177890.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4046693.50e-39

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.6478250.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-1.442942.12e-07

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostCD8+ T cells-0.4007942.41e-19

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD4+ T cells-0.4653889.90e-05

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD8+ T cells-0.5889234.14e-20

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreMalignant cells-0.4651560.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreNK cells-0.6160033.69e-03

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.3677492.75e-25

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2958691.39e-13

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3801830.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.3956293.35e-33

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2925530.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.4099260.00e+00

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Expression of FUS in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FUS

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

FUS

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating FUS

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FUShsa-miR-3613-3p99.1503NM_001170634
FUShsa-miR-373-5p93.5118NM_001170634
FUShsa-miR-616-5p93.5118NM_001170634
FUShsa-miR-371b-5p93.5118NM_001170634
FUShsa-miR-429391.1057NM_001170634
FUShsa-miR-428288.598NM_001170634
FUShsa-miR-4728-5p87.8118NM_001170634
FUShsa-miR-6780a-5p87.6238NM_001170634
FUShsa-miR-480387.5827NM_001170634
FUShsa-miR-313487.2275NM_001170634
FUShsa-miR-1273h-5p87.2038NM_001170634
FUShsa-miR-381-3p86.92NM_001170634
FUShsa-miR-30086.92NM_001170634
FUShsa-miR-6799-5p85.0176NM_001170634
FUShsa-miR-3689a-3p84.9054NM_001170634
FUShsa-miR-3689c84.9054NM_001170634
FUShsa-miR-6779-5p84.9054NM_001170634
FUShsa-miR-3689b-3p84.9054NM_001170634
FUShsa-miR-30b-3p84.9054NM_001170634
FUShsa-miR-338-3p84.1618NM_001170634
FUShsa-miR-6785-5p83.7108NM_001170634
FUShsa-miR-7106-5p83.7108NM_001170634
FUShsa-miR-4772-5p83.3362NM_001170634
FUShsa-miR-4446-3p83.0777NM_001170634
FUShsa-miR-513a-3p81.1606NM_001170634
FUShsa-miR-513c-3p81.1606NM_001170634
FUShsa-miR-3187-5p81.133NM_001170634
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Motifs and transcription factors (TFs) regulating FUS

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FUSjaspar__MA0079.5SP1 (directAnnotation).
FUSmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
FUSdbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
FUSmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
FUStaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
FUSmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
FUStaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
FUStransfac_pro__M00652NRF1 (directAnnotation).
FUStransfac_pro__M04866HDAC2 (directAnnotation).
FUSjaspar__MA1122.1TFDP1 (directAnnotation).
FUSswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
FUSmetacluster_141.2E2F2; E2F3 (directAnnotation).
FUSdbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
FUSmetacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
FUSmetacluster_172.6CHD2; E2F1 (directAnnotation).
FUShdpi__TIMELESSTIMELESS (directAnnotation).
FUStaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
FUStransfac_pro__M04944GABPA (directAnnotation).
FUSswissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
FUStransfac_pro__M06951TEF (directAnnotation).
FUStaipale_tf_pairs__TEAD4_ELK3_NCCGGAANNNNNNNMATWCC_CAP_reprELK3; TEAD4 (directAnnotation).
FUSjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
FUStransfac_pro__M00430E2F1 (directAnnotation).
FUSmetacluster_126.3LIN28B; LIN28B (directAnnotation).
FUStaipale_tf_pairs__TFAP2C_DLX3_NSCCNNNRGGCANNNNNNTAATKR_CAP_reprDLX3; TFAP2C (directAnnotation).
FUShocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
FUSkznf__ZNF343_Imbeault2017_OM_RCADEZNF343 (directAnnotation).
FUStaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
FUStransfac_pro__M06173ZNF85 (directAnnotation).
FUShdpi__ETS1ETS1 (directAnnotation).
FUStaipale_cyt_meth__NR4A1_NAAAGGTCAN_eDBD_1NR4A1 (directAnnotation).
FUStaipale_tf_pairs__FOXJ2_ELF1_RMAGAAAACCGAANN_CAP_reprELF1; FOXJ2 (directAnnotation).
FUStaipale_tf_pairs__FOXO1_ELF1_NNGAAAACCGAANM_CAPELF1; FOXO1 (directAnnotation).
FUSmetacluster_155.33ZNF16; ZNF816 (directAnnotation).
FUStfdimers__MD00007E2F1; IRF8 (directAnnotation).
FUStaipale_tf_pairs__TEAD4_HES7_RCATTCCNNNNNCRCGYGYN_CAP_reprHES7; TEAD4 (directAnnotation).
FUStaipale_tf_pairs__TEAD4_ELK1_RMATWCCGGAWRN_CAP_reprELK1; TEAD4 (directAnnotation).
FUStransfac_pro__M06724ZNF331 (directAnnotation).
FUStfdimers__MD00444SIRT6; TFAP2C (directAnnotation).
FUStransfac_pro__M05517IKZF2 (directAnnotation).
FUSswissregulon__hs__HDXHDX (directAnnotation).
FUStaipale_cyt_meth__NKX2-3_NTCGTTGAN_eDBD_methNKX2-3 (directAnnotation).
FUStransfac_pro__M06132ZNF823 (directAnnotation).
FUStransfac_pro__M06561ZNF502 (directAnnotation).
FUStransfac_public__M00396EN1 (directAnnotation).
FUSmetacluster_16.1SOX9; ZIK1; ZIK1; ZNF782 (directAnnotation). SOX9 (inferredBy_Orthology).
FUSmetacluster_91.4GZF1; HSFY2 (directAnnotation).
FUStransfac_pro__M01252E2F6 (directAnnotation).
FUSmetacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
FUStransfac_pro__M06672ZNF442 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1"MicroRNA-141 and its associated gene FUS modulate proliferation, migration and cisplatin chemosensitivity in neuroblastoma cell lines"