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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CYCS

Summary for CYCS

Gene informationGene symbol

CYCS

Ensembl ID

ENSG00000172115

Entrez ID

54205

Gene namecytochrome c, somatic
SynonymsCYC|HCS
Gene typeprotein_coding
UniProtAcc

P99999


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Dataset with differentially expressed gene: CYCS

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.5211760.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.515270.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.9318470.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.2652312.76e-14

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.2911024.84e-04

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.8785050.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-1.086980.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells0.289035.90e-10

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.7585915.50e-07

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.6649546.54e-28

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells-0.361483.09e-12

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells-0.2880062.53e-17

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5005810.00e+00

GSE161195

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapyDARA-KRD (daratumumab + carfilzomib + lenalidomide + dexamethasone)postMalignant cells0.3895070.00e+00

GSE149214

PC9 cell lineCell lineLung cancerEGFR-mutated non-small cell lung cancer (NSCLC)Targeted therapyerlotinibNAMalignant cells-0.2617671.36e-07

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.4198030.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostNK cells0.3318812.65e-22

GSE152469

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibNAMalignant cells0.3810160.00e+00

GSE152469

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibNACD8+ T cells0.4707748.02e-04

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.7223040.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.8943950.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-1.010960.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.8830510.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2643970.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostCD8+ T cells-0.3276328.16e-41

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostNK cells-0.2959837.40e-06

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostCD4+ T cells-0.2623336.95e-03

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreB cells-0.5069077.37e-28

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreNK cells-0.2523161.06e-10

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.4795250.00e+00

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Expression of CYCS in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CYCS

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CYCS

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CYCShsa-miR-4680-3p98.506NM_018947
CYCShsa-miR-497-3p94.5293NM_018947
CYCShsa-miR-302c-5p94.1559NM_018947
CYCShsa-miR-5692a91.4718NM_018947
CYCShsa-miR-205491.4029NM_018947
CYCShsa-miR-4789-3p91.0677NM_018947
CYCShsa-miR-5089-3p90.9994NM_018947
CYCShsa-miR-500a-5p90.6242NM_018947
CYCShsa-miR-4649-3p89.1242NM_018947
CYCShsa-miR-4777-5p88.2827NM_018947
CYCShsa-miR-4652-3p87.6388NM_018947
CYCShsa-miR-430387.6104NM_018947
CYCShsa-miR-428287.2387NM_018947
CYCShsa-miR-443287.0753NM_018947
CYCShsa-miR-797887.012NM_018947
CYCShsa-miR-3613-3p86.5417NM_018947
CYCShsa-miR-433-3p85.4816NM_018947
CYCShsa-miR-548t-3p84.2707NM_018947
CYCShsa-miR-548aa84.2707NM_018947
CYCShsa-miR-548ap-3p84.2707NM_018947
CYCShsa-miR-1252-3p83.8079NM_018947
CYCShsa-miR-568083.4733NM_018947
CYCShsa-miR-3934-5p83.4334NM_018947
CYCShsa-miR-532-5p82.7842NM_018947
CYCShsa-miR-442781.9993NM_018947
CYCShsa-miR-4724-5p81.5636NM_018947
CYCShsa-miR-10393-5p81.1981NM_018947
CYCShsa-miR-371481.0087NM_018947
CYCShsa-miR-4653-3p80.11NM_018947
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Motifs and transcription factors (TFs) regulating CYCS

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CYCShdpi__ETV4ETV4 (directAnnotation).
CYCShomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
CYCStransfac_pro__M04826EP300 (directAnnotation).
CYCSmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
CYCStransfac_pro__M04950EGR1 (directAnnotation).
CYCSmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
CYCStaipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
CYCStransfac_pro__M00652NRF1 (directAnnotation).
CYCStransfac_pro__M04866HDAC2 (directAnnotation).
CYCSjaspar__MA1122.1TFDP1 (directAnnotation).
CYCSswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
CYCStaipale_tf_pairs__ERF_CEBPD_RSMGGAANTTGCGYAAN_CAPCEBPD; ERF (directAnnotation).
CYCStaipale_tf_pairs__FLI1_CEBPD_RNCGGANNTTGCGCAAN_CAPCEBPD; FLI1 (directAnnotation).
CYCStaipale_tf_pairs__FLI1_CEBPB_RNCGGANNTTGCGCAAN_CAPCEBPB; FLI1 (directAnnotation).
CYCStaipale_tf_pairs__ERF_DLX2_RSCGGAANNNNNYMATTA_CAP_repr_1DLX2; ERF (directAnnotation).
CYCStransfac_pro__M06314ZNF239 (directAnnotation).
CYCStaipale_tf_pairs__TEAD4_HOXB13_CYAATAAAATGYN_CAP_reprHOXB13; TEAD4 (directAnnotation).
CYCStransfac_pro__M06476ZNF34 (directAnnotation).
CYCStransfac_pro__M06035ZNF749 (directAnnotation).
CYCStaipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
CYCSjaspar__MA0604.1ATF1 (inferredBy_Orthology).
CYCSmetacluster_111.4ATF1; ATF1; ATF1; ATF1; ATF1; ATF1; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF5; ATF6; ATF6B; ATF7; ATF7; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB3; CREB3L4; CREB3L4; CREB5; CREB5; CREB5; CREM; CREM; CREM; CREM; CREM; FOSB; FOSL1; FOSL1; FOSL2; JDP2; JDP2; JDP2; JUN; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; XBP1; XBP1; XBP1; ZNF629 (directAnnotation). ATF1; ATF1; ATF1; ATF2; ATF2; ATF3; ATF6; ATF6B; ATF7; ATF7; ATF7; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; BATF; BATF2; BATF3; CREB1; CREB1; CREB3; CREB3L1; CREB3L2; CREB3L3; CREB3L4; CREM; FOS; FOSB; FOSL1; FOSL2; JDP2; JDP2 (inferredBy_Orthology).
CYCStransfac_pro__M06251ZSCAN2 (inferredBy_Orthology).
CYCSmetacluster_111.5E4F1; E4F1 (directAnnotation).
CYCSflyfactorsurvey__fd64A_SANGER_5_FBgn0004895FOXL1 (inferredBy_Orthology).
CYCStransfac_pro__M01861ATF1 (directAnnotation).
CYCStransfac_pro__M05977ZNF257 (directAnnotation).
CYCStransfac_public__M00415ZEB1 (directAnnotation).
CYCSswissregulon__hs__SOX10SOX10 (directAnnotation).
CYCStaipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
CYCStransfac_pro__M06794ZNF107 (directAnnotation).
CYCSdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
CYCStransfac_pro__M05607MYBL1 (directAnnotation).
CYCStfdimers__MD00381SOX10 (directAnnotation).
CYCStransfac_pro__M06841ZNF507 (directAnnotation).
CYCShomer__GGCVGTTR_MYBMYB (inferredBy_Orthology).
CYCStfdimers__MD00546HOXC8; NFE2L1 (directAnnotation).
CYCStransfac_pro__M06363ZNF730 (directAnnotation).
CYCStransfac_pro__M12441ZNF281 (inferredBy_Orthology).
CYCStransfac_pro__M06097ZNF14 (directAnnotation).
CYCSmetacluster_141.2E2F2; E2F3 (directAnnotation).
CYCStransfac_pro__M01000AIRE (directAnnotation).
CYCStransfac_pro__M02279CREB1 (directAnnotation).
CYCSmetacluster_180.3ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6B; ATF7; ATF7; BACH2; BATF3; BATF3; CREB1; CREB1; CREB3; FOSL1; FOSL2; JDP2; JUN; JUN; JUN; JUND; JUND; XBP1; ZBTB21 (directAnnotation). JDP2; JDP2; JUND (inferredBy_Orthology).
CYCStaipale_tf_pairs__POU2F1_EOMES_NNNTATGCNNNGYGANNNNNNNNNNNCRCN_CAP_reprEOMES; POU2F1 (directAnnotation).
CYCStaipale_tf_pairs__ETV2_SOX15_RSCGGAWNNNNNNNACAATRN_CAP_reprETV2; SOX15 (directAnnotation).
CYCStransfac_public__M00039CREB1 (directAnnotation).
CYCStaipale_tf_pairs__ETV5_CEBPD_NSCGGANNTTRCGYAAN_CAPCEBPD; ETV5 (directAnnotation).
CYCSdbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
CYCShocomoco__GMEB2_HUMAN.H11MO.0.DGMEB2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CYCS"Artenimol"

DB11638

small molecule
CYCS"Ferroheme C"

DB03317

small molecule
CYCS"Imidazole"

DB03366

small molecule
CYCS"Minocycline"

DB01017

small molecule
CYCS"Protoporphyrin Ix Containing Co"

DB02110

small molecule
CYCS"Trimethyllysine"

DB03977

small molecule
CYCS"Zinc protoporphyrin"

DB03934

small molecule
CYCS"Zinc Substituted Heme C"

DB04249

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."