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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BNIP3L

Summary for BNIP3L

Gene informationGene symbol

BNIP3L

Ensembl ID

ENSG00000104765

Entrez ID

665

Gene nameBCL2 interacting protein 3 like
SynonymsBNIP3a|Nix
Gene typeprotein_coding
UniProtAcc

O60238


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Dataset with differentially expressed gene: BNIP3L

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.5367111.06e-04

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3258870.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.4704151.23e-21

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.2639171.07e-03

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preNK cells-0.4505290.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes0.3477511.06e-13

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.5557814.83e-14

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.8471780.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes0.6072692.66e-44

GSE158457

PDX cellsCell lineAcute lymphoblastic leukemiaT-cell acute lymphoblastic leukemia (ALL)Targeted therapydasatinibNAMalignant cells-0.4175020.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.9581840.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3428690.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3979390.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.3635531.63e-07

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.3883182.20e-26

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.2761513.50e-07

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.7763830.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3270320.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.288650.00e+00

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Expression of BNIP3L in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BNIP3L

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BNIP3L

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BNIP3Lhsa-miR-30d-5p94.1018NM_004331
BNIP3Lhsa-miR-30e-5p94.1018NM_004331
BNIP3Lhsa-miR-30b-5p94.1018NM_004331
BNIP3Lhsa-miR-30a-5p94.1018NM_004331
BNIP3Lhsa-miR-30c-5p94.1018NM_004331
BNIP3Lhsa-miR-5197-5p92.6752NM_004331
BNIP3Lhsa-miR-4666a-5p92.2222NM_004331
BNIP3Lhsa-miR-548g-3p91.678NM_004331
BNIP3Lhsa-miR-6791-3p91.4186NM_004331
BNIP3Lhsa-miR-6829-3p91.4186NM_004331
BNIP3Lhsa-miR-365891.2517NM_004331
BNIP3Lhsa-miR-320190.2822NM_004331
BNIP3Lhsa-miR-479189.7171NM_004331
BNIP3Lhsa-miR-971889.3465NM_004331
BNIP3Lhsa-miR-24-3p88.9583NM_004331
BNIP3Lhsa-miR-545-5p87.2396NM_004331
BNIP3Lhsa-miR-183-5p86.9192NM_004331
BNIP3Lhsa-miR-133b86.1087NM_004331
BNIP3Lhsa-miR-133a-3p86.1087NM_004331
BNIP3Lhsa-miR-9-3p85.5335NM_004331
BNIP3Lhsa-miR-628-5p85.4784NM_004331
BNIP3Lhsa-miR-34b-3p84.4864NM_004331
BNIP3Lhsa-miR-428284.1316NM_004331
BNIP3Lhsa-miR-5580-3p83.1703NM_004331
BNIP3Lhsa-miR-190a-3p82.7355NM_004331
BNIP3Lhsa-miR-197282.7118NM_004331
BNIP3Lhsa-miR-153-5p82.6169NM_004331
BNIP3Lhsa-miR-590-3p82.236NM_004331
BNIP3Lhsa-miR-4695-5p82.1738NM_004331
BNIP3Lhsa-miR-23c80.7501NM_004331
BNIP3Lhsa-miR-23a-3p80.7501NM_004331
BNIP3Lhsa-miR-23b-3p80.7501NM_004331
BNIP3Lhsa-miR-367180.2388NM_004331
BNIP3Lhsa-miR-302e80.0018NM_004331
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Motifs and transcription factors (TFs) regulating BNIP3L

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BNIP3Ltaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
BNIP3Ltaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
BNIP3Lmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
BNIP3Lkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
BNIP3Lkznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
BNIP3Lmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
BNIP3Lmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
BNIP3Lmetacluster_3.14WT1; WT1 (directAnnotation).
BNIP3Lswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
BNIP3Lcisbp__M07938E2F1 (directAnnotation).
BNIP3Ltaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
BNIP3Ltransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
BNIP3Ltransfac_pro__M07397ZNF148 (directAnnotation).
BNIP3Lmetacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
BNIP3Lmetacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
BNIP3Ldbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
BNIP3Ltaipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
BNIP3Lmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
BNIP3Lmetacluster_7.13ZFX (directAnnotation).
BNIP3Lmetacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
BNIP3Lhomer__GGGGGGGG_MazMAZ (directAnnotation).
BNIP3Ltransfac_pro__M01175ZBTB7B (directAnnotation).
BNIP3Ltaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
BNIP3Ltfdimers__MD00151CHURC1 (directAnnotation).
BNIP3Lmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
BNIP3Lmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
BNIP3Ltransfac_pro__M01303SP1 (directAnnotation).
BNIP3Lmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
BNIP3Lswissregulon__hs__CHD1CHD1 (directAnnotation).
BNIP3Ltransfac_pro__M02090E2F4 (directAnnotation).
BNIP3Ltransfac_pro__M01714KLF15 (directAnnotation).
BNIP3Lmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
BNIP3Ljaspar__MA1122.1TFDP1 (directAnnotation).
BNIP3Lhocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
BNIP3Ltransfac_pro__M02089E2F3 (directAnnotation).
BNIP3Lmetacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
BNIP3Lmetacluster_126.3LIN28B; LIN28B (directAnnotation).
BNIP3Lhocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
BNIP3Lmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
BNIP3Lkznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
BNIP3Lhomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
BNIP3Ltransfac_pro__M07436WT1 (directAnnotation).
BNIP3Ltransfac_pro__M02281SP1 (directAnnotation).
BNIP3Ltaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
BNIP3Lkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
BNIP3Lmetacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
BNIP3Ltransfac_pro__M02898SMAD3 (directAnnotation).
BNIP3Ltransfac_public__M00491PATZ1 (directAnnotation).
BNIP3Ltransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
BNIP3Lkznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."