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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ACBD3

Summary for ACBD3

Gene informationGene symbol

ACBD3

Ensembl ID

ENSG00000182827

Entrez ID

64746

Gene nameacyl-CoA binding domain containing 3
SynonymsGCP60|GOCAP1|GOLPH1|PAP7
Gene typeprotein_coding
UniProtAcc

Q9H3P7


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Dataset with differentially expressed gene: ACBD3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.287438.26e-25

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.6664950.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.4008880.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.3856560.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2569394.81e-39

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2898265.95e-18

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Expression of ACBD3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ACBD3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ACBD3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ACBD3hsa-miR-561-3p99.143NM_022735
ACBD3hsa-miR-548c-3p97.5951NM_022735
ACBD3hsa-miR-196a-1-3p96.3615NM_022735
ACBD3hsa-miR-1277-5p96.3558NM_022735
ACBD3hsa-miR-4668-3p95.9236NM_022735
ACBD3hsa-miR-144-3p94.9346NM_022735
ACBD3hsa-miR-9-3p94.1338NM_022735
ACBD3hsa-miR-548aa92.4085NM_022735
ACBD3hsa-miR-548ap-3p92.4085NM_022735
ACBD3hsa-miR-548t-3p92.4085NM_022735
ACBD3hsa-miR-4671-3p91.7304NM_022735
ACBD3hsa-miR-6830-5p91.0723NM_022735
ACBD3hsa-miR-797790.8428NM_022735
ACBD3hsa-miR-5187-3p89.9629NM_022735
ACBD3hsa-miR-806289.5815NM_022735
ACBD3hsa-miR-302c-5p89.565NM_022735
ACBD3hsa-miR-509-3-5p88.7224NM_022735
ACBD3hsa-miR-509-5p88.7224NM_022735
ACBD3hsa-miR-651-3p88.3804NM_022735
ACBD3hsa-miR-3145-3p88.3762NM_022735
ACBD3hsa-miR-1211388.2348NM_022735
ACBD3hsa-miR-441886.9049NM_022735
ACBD3hsa-miR-4482-3p86.7881NM_022735
ACBD3hsa-miR-449b-5p86.7116NM_022735
ACBD3hsa-miR-34c-5p86.7116NM_022735
ACBD3hsa-miR-607386.6181NM_022735
ACBD3hsa-miR-453986.4985NM_022735
ACBD3hsa-miR-58786.4953NM_022735
ACBD3hsa-miR-34a-5p85.4893NM_022735
ACBD3hsa-miR-449a85.4893NM_022735
ACBD3hsa-miR-194-5p85.4871NM_022735
ACBD3hsa-miR-30d-3p84.9678NM_022735
ACBD3hsa-miR-30a-3p84.9678NM_022735
ACBD3hsa-miR-30e-3p84.9678NM_022735
ACBD3hsa-miR-320d84.8553NM_022735
ACBD3hsa-miR-320b84.8553NM_022735
ACBD3hsa-miR-320a-3p84.8553NM_022735
ACBD3hsa-miR-442984.8553NM_022735
ACBD3hsa-miR-320c84.8553NM_022735
ACBD3hsa-miR-876-5p84.6623NM_022735
ACBD3hsa-miR-548y84.2262NM_022735
ACBD3hsa-miR-186-3p83.7096NM_022735
ACBD3hsa-miR-316783.6486NM_022735
ACBD3hsa-miR-98-3p83.5807NM_022735
ACBD3hsa-let-7a-3p83.5807NM_022735
ACBD3hsa-let-7b-3p83.5807NM_022735
ACBD3hsa-let-7f-1-3p83.5807NM_022735
ACBD3hsa-miR-6868-5p83.3039NM_022735
ACBD3hsa-miR-55982.723NM_022735
ACBD3hsa-miR-316382.6178NM_022735
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Motifs and transcription factors (TFs) regulating ACBD3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ACBD3transfac_pro__M07436WT1 (directAnnotation).
ACBD3transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ACBD3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ACBD3transfac_pro__M01122ZNF219 (directAnnotation).
ACBD3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ACBD3cisbp__M00249WT1 (directAnnotation).
ACBD3transfac_pro__M01303SP1 (directAnnotation).
ACBD3transfac_pro__M04595SALL2 (directAnnotation).
ACBD3transfac_pro__M07397ZNF148 (directAnnotation).
ACBD3metacluster_135.11NR2C2 (directAnnotation).
ACBD3metacluster_160.20JUND; PRDM15 (directAnnotation).
ACBD3cisbp__M00341PAX6 (directAnnotation).
ACBD3metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ACBD3metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
ACBD3jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
ACBD3metacluster_61.1DEAF1; DEAF1 (directAnnotation).
ACBD3metacluster_175.1ZNF283 (directAnnotation).
ACBD3transfac_pro__M02844BCL6B (inferredBy_Orthology).
ACBD3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ACBD3kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
ACBD3hdpi__HIP2UBE2K (directAnnotation).
ACBD3transfac_pro__M02898SMAD3 (directAnnotation).
ACBD3metacluster_191.5SPDEF (inferredBy_Orthology).
ACBD3taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
ACBD3hdpi__TIMELESSTIMELESS (directAnnotation).
ACBD3transfac_pro__M04893TAF1 (directAnnotation).
ACBD3jaspar__MA1721.1ZNF93 (directAnnotation).
ACBD3kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
ACBD3dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
ACBD3swissregulon__hs__CHD1CHD1 (directAnnotation).
ACBD3homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
ACBD3kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
ACBD3kznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
ACBD3transfac_pro__M01088DEAF1 (inferredBy_Orthology).
ACBD3transfac_pro__M12697ZNF142 (directAnnotation).
ACBD3tfdimers__MD00364WT1 (directAnnotation).
ACBD3metacluster_126.3LIN28B; LIN28B (directAnnotation).
ACBD3metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
ACBD3transfac_pro__M01973PLAG1 (directAnnotation).
ACBD3transfac_pro__M02861GATA6 (inferredBy_Orthology).
ACBD3metacluster_143.13ZBTB7A (directAnnotation).
ACBD3hocomoco__XBP1_HUMAN.H11MO.0.DXBP1 (directAnnotation).
ACBD3transfac_pro__M07387ZBTB7A (directAnnotation).
ACBD3kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
ACBD3metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
ACBD3taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ACBD3metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
ACBD3taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
ACBD3taipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
ACBD3metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."