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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ATXN1

Summary for ATXN1

Gene informationGene symbol

ATXN1

Ensembl ID

ENSG00000124788

Entrez ID

6310

Gene nameataxin 1
SynonymsATX1|D6S504E|SCA1
Gene typeprotein_coding
UniProtAcc

P54253


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Dataset with differentially expressed gene: ATXN1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.214381.80e-07

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4474522.38e-44

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.2746142.20e-13

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3154410.00e+00

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Expression of ATXN1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ATXN1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ATXN1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ATXN1hsa-miR-1178-3p84.2569NM_000332
ATXN1hsa-miR-17-5p84.2437NM_000332
ATXN1hsa-miR-106a-5p84.1145NM_000332
ATXN1hsa-miR-4446-5p84.0894NM_000332
ATXN1hsa-miR-3191-5p84.0053NM_000332
ATXN1hsa-miR-428283.99NM_000332
ATXN1hsa-miR-548t-5p83.8759NM_000332
ATXN1hsa-miR-548az-5p83.8759NM_000332
ATXN1hsa-miR-7154-3p83.5969NM_000332
ATXN1hsa-miR-624-3p83.5169NM_000332
ATXN1hsa-miR-302e83.3213NM_000332
ATXN1hsa-miR-181d-5p82.7517NM_000332
ATXN1hsa-miR-181b-5p82.7517NM_000332
ATXN1hsa-miR-181c-5p82.7517NM_000332
ATXN1hsa-miR-181a-5p82.7517NM_000332
ATXN1hsa-miR-5582-3p82.595NM_000332
ATXN1hsa-miR-6780a-5p82.5226NM_000332
ATXN1hsa-miR-130582.2561NM_000332
ATXN1hsa-miR-63982.233NM_000332
ATXN1hsa-miR-1273h-5p82.1921NM_000332
ATXN1hsa-miR-30b-3p82.1921NM_000332
ATXN1hsa-miR-3689b-3p82.1921NM_000332
ATXN1hsa-miR-6779-5p82.1921NM_000332
ATXN1hsa-miR-3689a-3p82.1921NM_000332
ATXN1hsa-miR-3689c82.1921NM_000332
ATXN1hsa-miR-23a-3p82.1409NM_000332
ATXN1hsa-miR-23c82.1409NM_000332
ATXN1hsa-miR-23b-3p82.1409NM_000332
ATXN1hsa-miR-6873-3p82.1233NM_000332
ATXN1hsa-miR-6881-3p82.1095NM_000332
ATXN1hsa-miR-426282.0442NM_000332
ATXN1hsa-miR-4436b-5p82.0418NM_000332
ATXN1hsa-miR-370-3p81.7205NM_000332
ATXN1hsa-miR-7162-3p81.5142NM_000332
ATXN1hsa-miR-520d-5p81.2738NM_000332
ATXN1hsa-miR-524-5p81.2738NM_000332
ATXN1hsa-miR-568081.244NM_000332
ATXN1hsa-miR-337-3p81.2339NM_000332
ATXN1hsa-miR-627-3p81.0616NM_000332
ATXN1hsa-miR-128680.6782NM_000332
ATXN1hsa-miR-152-3p80.6664NM_000332
ATXN1hsa-miR-148a-3p80.6664NM_000332
ATXN1hsa-miR-148b-3p80.6664NM_000332
ATXN1hsa-miR-3922-3p80.066NM_000332
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Motifs and transcription factors (TFs) regulating ATXN1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ATXN1taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
ATXN1transfac_pro__M06035ZNF749 (directAnnotation).
ATXN1kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
ATXN1transfac_pro__M05788ZNF569 (inferredBy_Orthology).
ATXN1metacluster_52.11ZNF184 (directAnnotation).
ATXN1metacluster_7.8ZBTB7A; ZNF28 (directAnnotation).
ATXN1kznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
ATXN1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
ATXN1hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
ATXN1kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
ATXN1transfac_pro__M04617ZBTB7A (directAnnotation).
ATXN1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ATXN1kznf__ZNF529_Imbeault2017_RP_ChIP-seqZNF529 (directAnnotation).
ATXN1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ATXN1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
ATXN1transfac_pro__M07387ZBTB7A (directAnnotation).
ATXN1transfac_pro__M07436WT1 (directAnnotation).
ATXN1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ATXN1transfac_pro__M00716ZBTB14 (directAnnotation).
ATXN1swissregulon__hs__CHD1CHD1 (directAnnotation).
ATXN1hdpi__HIP2UBE2K (directAnnotation).
ATXN1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ATXN1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
ATXN1transfac_pro__M04893TAF1 (directAnnotation).
ATXN1transfac_pro__M03876ZBTB33 (directAnnotation).
ATXN1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ATXN1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
ATXN1kznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
ATXN1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ATXN1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ATXN1kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
ATXN1metacluster_157.2ATF3; ATF3; ATF3; BACH1; BACH1; BACH1; BACH2; BACH2; BACH2; BACH2; BATF; BATF; BCL11A; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JDP2; JDP2; JDP2; JDP2; JDP2; JDP2; JDP2; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; JUND; JUND; JUND; JUND; MAF; MAFB; MAFF; MAFG; MAFK; NFE2; NFE2; NFE2; NFE2; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2; NFE2L3; ZNF3; ZSCAN5C (directAnnotation). FOSL1; JUN; JUN; JUN; JUNB; JUNB; JUND (inferredBy_Orthology).
ATXN1jaspar__MA1125.1ZNF384 (directAnnotation).
ATXN1kznf__CTCF_Rhee2011.2_ChIP-exoCTCF (directAnnotation).
ATXN1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
ATXN1transfac_pro__M01253CNOT3 (directAnnotation).
ATXN1metacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
ATXN1transfac_pro__M02089E2F3 (directAnnotation).
ATXN1transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
ATXN1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
ATXN1transfac_pro__M04916TAF1 (directAnnotation).
ATXN1transfac_pro__M12697ZNF142 (directAnnotation).
ATXN1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
ATXN1transfac_pro__M04918EGR1 (directAnnotation).
ATXN1metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
ATXN1metacluster_7.13ZFX (directAnnotation).
ATXN1tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
ATXN1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ATXN1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
ATXN1cisbp__M00249WT1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."