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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SOX6

Summary for SOX6

Gene informationGene symbol

SOX6

Ensembl ID

ENSG00000110693

Entrez ID

55553

Gene nameSRY-box transcription factor 6
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P35712


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Dataset with differentially expressed gene: SOX6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.3217134.92e-10

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3315620.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.2877891.16e-02

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Expression of SOX6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SOX6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SOX6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOX6hsa-miR-137-3p86.732NM_001145811
SOX6hsa-miR-6893-5p86.7074NM_001145811
SOX6hsa-miR-6808-5p86.7074NM_001145811
SOX6hsa-miR-548z86.6976NM_001145811
SOX6hsa-miR-548ac86.6976NM_001145811
SOX6hsa-miR-548h-3p86.6976NM_001145811
SOX6hsa-miR-548n86.6124NM_001145811
SOX6hsa-miR-44886.6093NM_001145811
SOX6hsa-miR-23a-3p86.5839NM_001145811
SOX6hsa-miR-23c86.5839NM_001145811
SOX6hsa-miR-23b-3p86.5839NM_001145811
SOX6hsa-miR-94086.4196NM_001145811
SOX6hsa-miR-64086.3845NM_001145811
SOX6hsa-miR-4666a-3p86.1163NM_001145811
SOX6hsa-miR-4766-5p85.8733NM_001145811
SOX6hsa-miR-942-3p85.7781NM_001145811
SOX6hsa-miR-182-5p85.3897NM_001145811
SOX6hsa-miR-342-3p85.26NM_001145811
SOX6hsa-miR-450b-5p85.1051NM_001145811
SOX6hsa-miR-302e84.7483NM_001145811
SOX6hsa-miR-453484.7128NM_001145811
SOX6hsa-miR-153-5p84.6384NM_001145811
SOX6hsa-miR-3121-3p84.583NM_001145811
SOX6hsa-miR-4782-5p84.5439NM_001145811
SOX6hsa-miR-570684.5439NM_001145811
SOX6hsa-miR-548bb-3p84.5328NM_001145811
SOX6hsa-miR-548d-3p84.5328NM_001145811
SOX6hsa-miR-433-3p84.455NM_001145811
SOX6hsa-miR-428284.1932NM_001145811
SOX6hsa-miR-7-5p84.1516NM_001145811
SOX6hsa-miR-574-5p83.8171NM_001145811
SOX6hsa-miR-4697-3p83.7554NM_001145811
SOX6hsa-miR-497-5p83.3438NM_001145811
SOX6hsa-miR-15b-5p83.3438NM_001145811
SOX6hsa-miR-15a-5p83.3438NM_001145811
SOX6hsa-miR-424-5p83.3438NM_001145811
SOX6hsa-miR-195-5p83.3438NM_001145811
SOX6hsa-miR-16-5p83.3438NM_001145811
SOX6hsa-miR-6838-5p83.3438NM_001145811
SOX6hsa-miR-3944-5p82.9923NM_001145811
SOX6hsa-miR-378a-5p82.9141NM_001145811
SOX6hsa-miR-469882.8153NM_001145811
SOX6hsa-miR-18a-5p82.5964NM_001145811
SOX6hsa-miR-18b-5p82.5964NM_001145811
SOX6hsa-miR-1285-5p82.5692NM_001145811
SOX6hsa-miR-3065-5p82.5387NM_001145811
SOX6hsa-miR-519382.5159NM_001145811
SOX6hsa-miR-317182.3539NM_001145811
SOX6hsa-miR-4742-5p82.1429NM_001145811
SOX6hsa-miR-808281.8548NM_001145811
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Motifs and transcription factors (TFs) regulating SOX6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOX6metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
SOX6metacluster_141.4GLIS2 (directAnnotation).
SOX6jaspar__MA1460.1YY1 (inferredBy_Orthology).
SOX6metacluster_101.3MYB (directAnnotation).
SOX6flyfactorsurvey__pho_SOLEXA_F1-3YY1 (inferredBy_Orthology).
SOX6metacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
SOX6metacluster_172.6CHD2; E2F1 (directAnnotation).
SOX6cisbp__M02645ETS1 (directAnnotation).
SOX6swissregulon__hs__GMEB2GMEB2 (directAnnotation).
SOX6hdpi__TIMELESSTIMELESS (directAnnotation).
SOX6taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
SOX6homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
SOX6taipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNYWTTGT_CAP_reprETV2; SOX15 (directAnnotation).
SOX6transfac_pro__M06404ZNF497 (directAnnotation).
SOX6metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
SOX6kznf__ZNF343_Imbeault2017_OM_RCADEZNF343 (directAnnotation).
SOX6taipale_tf_pairs__GCM1_FIGLA_CASSTGNNNNNNNNNNTGCGGG_CAP_reprFIGLA; GCM1 (directAnnotation).
SOX6metacluster_181.1EGR2; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI1; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI2; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLIS1; ZBTB7A; ZBTB7A; ZBTB7B; ZBTB7B; ZBTB7B; ZBTB7C; ZFP2; ZIC1; ZIC1; ZIC1; ZIC2; ZIC2; ZIC3; ZNF449; ZNF71 (directAnnotation). GLI1; GLI1; GLI2; GLI2; GLI2; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; GLI3; VPS72; ZIC3; ZXDA; ZXDA; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
SOX6taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."