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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PHIP

Summary for PHIP

Gene informationGene symbol

PHIP

Ensembl ID

ENSG00000146247

Entrez ID

55023

Gene namepleckstrin homology domain interacting protein
SynonymsBRWD2|DCAF14|FLJ20705|ndrp|WDR11
Gene typeprotein_coding
UniProtAcc

Q8WWQ0


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Dataset with differentially expressed gene: PHIP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4168740.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.2604142.74e-08

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.2883775.39e-03

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.2513771.06e-16

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.3565820.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2505360.00e+00

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Expression of PHIP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PHIP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PHIP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PHIPhsa-miR-548e-5p87.792NM_017934
PHIPhsa-miR-545-5p87.7173NM_017934
PHIPhsa-miR-411-3p87.6205NM_017934
PHIPhsa-miR-379-3p87.6205NM_017934
PHIPhsa-miR-302c-5p87.5321NM_017934
PHIPhsa-miR-4666b87.4529NM_017934
PHIPhsa-miR-519d-3p87.4094NM_017934
PHIPhsa-miR-17-5p87.4094NM_017934
PHIPhsa-miR-106b-5p87.4094NM_017934
PHIPhsa-miR-20b-5p87.4094NM_017934
PHIPhsa-miR-93-5p87.4094NM_017934
PHIPhsa-miR-526b-3p87.4094NM_017934
PHIPhsa-miR-106a-5p87.4094NM_017934
PHIPhsa-miR-20a-5p87.4094NM_017934
PHIPhsa-miR-7159-3p87.2094NM_017934
PHIPhsa-miR-476587.1664NM_017934
PHIPhsa-miR-449687.1608NM_017934
PHIPhsa-miR-548l87.1262NM_017934
PHIPhsa-miR-475287.0776NM_017934
PHIPhsa-miR-340-5p86.9113NM_017934
PHIPhsa-miR-54386.8234NM_017934
PHIPhsa-miR-61386.6562NM_017934
PHIPhsa-miR-9983-3p86.4731NM_017934
PHIPhsa-miR-1250-3p86.3417NM_017934
PHIPhsa-miR-450b-5p86.2269NM_017934
PHIPhsa-miR-4781-3p86.1677NM_017934
PHIPhsa-miR-63486.0464NM_017934
PHIPhsa-miR-548g-3p86.0459NM_017934
PHIPhsa-miR-129-5p85.8574NM_017934
PHIPhsa-miR-101-5p85.5676NM_017934
PHIPhsa-miR-1468-3p85.5309NM_017934
PHIPhsa-miR-1212985.4963NM_017934
PHIPhsa-miR-548aw85.4781NM_017934
PHIPhsa-miR-715085.245NM_017934
PHIPhsa-miR-376c-5p85.0098NM_017934
PHIPhsa-miR-376b-5p85.0098NM_017934
PHIPhsa-miR-9-5p84.8415NM_017934
PHIPhsa-miR-314984.8348NM_017934
PHIPhsa-miR-548p84.5778NM_017934
PHIPhsa-miR-6733-3p84.4873NM_017934
PHIPhsa-miR-1212484.2772NM_017934
PHIPhsa-miR-509384.1501NM_017934
PHIPhsa-miR-4714-3p84.15NM_017934
PHIPhsa-miR-397484.1256NM_017934
PHIPhsa-miR-6738-3p83.8419NM_017934
PHIPhsa-miR-3074-5p83.8095NM_017934
PHIPhsa-miR-4446-5p83.5839NM_017934
PHIPhsa-miR-548aj-3p83.1975NM_017934
PHIPhsa-miR-548x-3p83.1975NM_017934
PHIPhsa-miR-181d-5p83.0897NM_017934
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Motifs and transcription factors (TFs) regulating PHIP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PHIPtaipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
PHIPtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
PHIPkznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
PHIPtaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
PHIPkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
PHIPkznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
PHIPmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PHIPmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
PHIPmetacluster_3.14WT1; WT1 (directAnnotation).
PHIPswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
PHIPcisbp__M07938E2F1 (directAnnotation).
PHIPtaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PHIPtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PHIPtransfac_pro__M07397ZNF148 (directAnnotation).
PHIPmetacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
PHIPmetacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
PHIPtaipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
PHIPmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
PHIPmetacluster_7.13ZFX (directAnnotation).
PHIPmetacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
PHIPhomer__GGGGGGGG_MazMAZ (directAnnotation).
PHIPtransfac_pro__M01175ZBTB7B (directAnnotation).
PHIPtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PHIPtfdimers__MD00151CHURC1 (directAnnotation).
PHIPmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
PHIPmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
PHIPtransfac_pro__M01303SP1 (directAnnotation).
PHIPmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PHIPswissregulon__hs__CHD1CHD1 (directAnnotation).
PHIPtransfac_pro__M02090E2F4 (directAnnotation).
PHIPtransfac_pro__M01714KLF15 (directAnnotation).
PHIPmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
PHIPjaspar__MA1122.1TFDP1 (directAnnotation).
PHIPhocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
PHIPtransfac_pro__M02089E2F3 (directAnnotation).
PHIPtransfac_pro__M12604ZNF444 (directAnnotation).
PHIPmetacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
PHIPmetacluster_126.3LIN28B; LIN28B (directAnnotation).
PHIPhocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
PHIPmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
PHIPkznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
PHIPhomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
PHIPtransfac_pro__M07436WT1 (directAnnotation).
PHIPtransfac_pro__M02281SP1 (directAnnotation).
PHIPtaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
PHIPkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PHIPtransfac_pro__M02898SMAD3 (directAnnotation).
PHIPtransfac_public__M00491PATZ1 (directAnnotation).
PHIPtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
PHIPmetacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."