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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: KRAS

Summary for KRAS

Gene informationGene symbol

KRAS

Ensembl ID

ENSG00000133703

Entrez ID

3845

Gene nameKRAS proto-oncogene, GTPase
SynonymsK-Ras4B|KRAS1|KRAS2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: KRAS

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2579860.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.4508820.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.6250320.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.443120.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2991990.00e+00

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Expression of KRAS in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KRAS

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

KRAS

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating KRAS

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KRAShsa-miR-3117-3p82.8393NM_033360
KRAShsa-miR-4433a-5p82.6637NM_004985
KRAShsa-miR-580-5p82.4039NM_004985
KRAShsa-miR-1212481.9143NM_004985
KRAShsa-miR-433-3p81.7861NM_004985
KRAShsa-miR-335-3p81.6977NM_004985
KRAShsa-miR-4659a-3p81.2573NM_033360
KRAShsa-miR-4659b-3p81.2573NM_033360
KRAShsa-miR-391681.1678NM_033360
KRAShsa-miR-6859-5p81.1678NM_033360
KRAShsa-miR-7853-5p81.1584NM_004985
KRAShsa-miR-105-5p81.1584NM_004985
KRAShsa-miR-3688-3p81.113NM_033360
KRAShsa-miR-806281.0365NM_004985
KRAShsa-miR-142-5p80.5838NM_004985
KRAShsa-miR-442280.5555NM_004985
KRAShsa-miR-5590-3p80.4795NM_004985
KRAShsa-miR-590-3p80.3593NM_004985
KRAShsa-miR-30b-5p80.0595NM_033360
KRAShsa-miR-30d-5p80.0595NM_033360
KRAShsa-miR-30e-5p80.0595NM_033360
KRAShsa-miR-30a-5p80.0595NM_033360
KRAShsa-miR-30c-5p80.0595NM_033360
KRAShsa-miR-1255b-2-3p80.0043NM_004985
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Motifs and transcription factors (TFs) regulating KRAS

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KRAStaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
KRASkznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
KRAStaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
KRASkznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
KRASkznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
KRASmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
KRASmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
KRASmetacluster_3.14WT1; WT1 (directAnnotation).
KRASswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
KRAScisbp__M07938E2F1 (directAnnotation).
KRAStransfac_pro__M06035ZNF749 (directAnnotation).
KRASkznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
KRASmetacluster_52.11ZNF184 (directAnnotation).
KRASmetacluster_7.8ZBTB7A; ZNF28 (directAnnotation).
KRASmetacluster_135.11NR2C2 (directAnnotation).
KRASmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
KRASmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
KRASmetacluster_7.13ZFX (directAnnotation).
KRASkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
KRAScisbp__M00968MTF2 (directAnnotation).
KRASmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
KRASmetacluster_160.20JUND; PRDM15 (directAnnotation).
KRAScisbp__M00341PAX6 (directAnnotation).
KRASmetacluster_198.3ZFP64 (directAnnotation).
KRASmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
KRASmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
KRASjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
KRASmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
KRAScisbp__M00788ZFY (inferredBy_Orthology).
KRASkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
KRASmetacluster_175.1ZNF283 (directAnnotation).
KRAShdpi__ZNF304ZNF304 (directAnnotation).
KRAStransfac_pro__M02844BCL6B (inferredBy_Orthology).
KRASmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
KRASmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
KRAStransfac_pro__M01199TRIM28 (directAnnotation).
KRASkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
KRASmetacluster_151.2ZNF23 (directAnnotation).
KRAStransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
KRAStransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
KRAStransfac_pro__M03806ZBTB7C (directAnnotation).
KRAStransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
KRASmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
KRAScisbp__M00249WT1 (directAnnotation).
KRAStransfac_pro__M01122ZNF219 (directAnnotation).
KRAStaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
KRAStaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
KRASdbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
KRASkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
KRAStaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
KRAS"Adagrasib"

DB15568

small molecule
KRAS"Farnesyl diphosphate"

DB07780

small molecule
KRAS"Sotorasib"

DB15569

small molecule
KRAS"[(3,7,11-TRIMETHYL-DODECA-2,6,10-TRIENYLOXYCARBAMOYL)-METHYL]-PHOSPHONIC ACID"

DB07771

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."