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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GPATCH2L

Summary for GPATCH2L

Gene informationGene symbol

GPATCH2L

Ensembl ID

ENSG00000089916

Entrez ID

55668

Gene nameG-patch domain containing 2 like
SynonymsC14orf118|FLJ10033|FLJ20689
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: GPATCH2L

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3247394.60e-33

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Expression of GPATCH2L in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GPATCH2L

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GPATCH2L

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GPATCH2Lhsa-miR-453385.1912NM_001322027
GPATCH2Lhsa-miR-368685.1215NM_001322027
GPATCH2Lhsa-miR-6873-3p84.7464NM_017926
GPATCH2Lhsa-miR-6867-3p84.724NM_001322027
GPATCH2Lhsa-miR-3120-3p84.7065NM_001322026
GPATCH2Lhsa-miR-442284.5755NM_001322027
GPATCH2Lhsa-miR-6760-5p84.1984NM_001322030
GPATCH2Lhsa-miR-425-5p84.1878NM_001322030
GPATCH2Lhsa-miR-128-3p84.1351NM_001322030
GPATCH2Lhsa-miR-216a-3p84.1351NM_001322030
GPATCH2Lhsa-miR-3187-3p84.0853NM_017926
GPATCH2Lhsa-miR-7151-3p84.0557NM_001322031
GPATCH2Lhsa-miR-548f-5p83.9976NM_017926
GPATCH2Lhsa-miR-452883.7944NM_001322026
GPATCH2Lhsa-miR-1468-3p83.6677NM_017926
GPATCH2Lhsa-miR-132-3p83.517NM_017926
GPATCH2Lhsa-miR-212-3p83.517NM_017926
GPATCH2Lhsa-miR-371a-5p83.451NM_001322030
GPATCH2Lhsa-miR-445683.3244NM_017926
GPATCH2Lhsa-miR-211-5p83.3206NM_001322027
GPATCH2Lhsa-miR-204-5p83.3206NM_001322027
GPATCH2Lhsa-miR-3691-3p83.1717NM_001322026
GPATCH2Lhsa-miR-42983.1647NM_017926
GPATCH2Lhsa-miR-4722-5p83.0748NM_001322031
GPATCH2Lhsa-miR-6509-3p82.9925NM_017926
GPATCH2Lhsa-miR-312582.9845NM_001322031
GPATCH2Lhsa-miR-3678-3p82.9006NM_001322031
GPATCH2Lhsa-miR-6809-3p82.8826NM_001322031
GPATCH2Lhsa-miR-494-3p82.8342NM_001322030
GPATCH2Lhsa-miR-5011-5p82.8095NM_001322031
GPATCH2Lhsa-miR-127682.7653NM_001322031
GPATCH2Lhsa-miR-450b-5p82.7608NM_001322032
GPATCH2Lhsa-miR-6515-5p82.7239NM_017926
GPATCH2Lhsa-miR-510-3p82.6195NM_017926
GPATCH2Lhsa-miR-6508-5p82.5948NM_001322027
GPATCH2Lhsa-miR-6796-3p82.5606NM_017926
GPATCH2Lhsa-miR-467282.4918NM_017926
GPATCH2Lhsa-miR-323b-3p82.4623NM_017926
GPATCH2Lhsa-miR-451b82.3996NM_001322031
GPATCH2Lhsa-miR-548an82.2218NM_001322030
GPATCH2Lhsa-miR-425182.1839NM_001322030
GPATCH2Lhsa-miR-376a-5p82.166NM_001322026
GPATCH2Lhsa-miR-4786-5p82.0243NM_017926
GPATCH2Lhsa-miR-426482.0229NM_017926
GPATCH2Lhsa-miR-320181.9508NM_001322027
GPATCH2Lhsa-miR-345-3p81.7704NM_017926
GPATCH2Lhsa-miR-597-3p81.6808NM_017926
GPATCH2Lhsa-miR-524-5p81.585NM_001322030
GPATCH2Lhsa-miR-520d-5p81.585NM_001322030
GPATCH2Lhsa-miR-3922-5p81.5682NM_017926
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Motifs and transcription factors (TFs) regulating GPATCH2L

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GPATCH2Lmetacluster_7.13ZFX (directAnnotation).
GPATCH2Lkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
GPATCH2Lmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GPATCH2Lmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
GPATCH2Lcisbp__M00788ZFY (inferredBy_Orthology).
GPATCH2Lmetacluster_175.1ZNF283 (directAnnotation).
GPATCH2Ltransfac_pro__M02844BCL6B (inferredBy_Orthology).
GPATCH2Lmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
GPATCH2Lmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GPATCH2Lkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
GPATCH2Ltransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."