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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ZFHX3

Summary for ZFHX3

Gene informationGene symbol

ZFHX3

Ensembl ID

ENSG00000140836

Entrez ID

463

Gene namezinc finger homeobox 3
SynonymsATBF1|C16orf47|FLJ26184|ZNF927
Gene typeprotein_coding
UniProtAcc

Q15911


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Dataset with differentially expressed gene: ZFHX3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.5242080.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.3226872.93e-11

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.5322130.00e+00

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Expression of ZFHX3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ZFHX3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating ZFHX3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ZFHX3hsa-miR-30a-3p94.5438NM_001164766
ZFHX3hsa-miR-425194.3603NM_001164766
ZFHX3hsa-miR-4711-5p94.3021NM_001164766
ZFHX3hsa-miR-4796-3p94.2353NM_001164766
ZFHX3hsa-miR-432894.2249NM_001164766
ZFHX3hsa-miR-80293.4518NM_001164766
ZFHX3hsa-miR-129093.0479NM_001164766
ZFHX3hsa-miR-450492.9137NM_001164766
ZFHX3hsa-miR-570-3p92.8704NM_001164766
ZFHX3hsa-miR-194-5p91.7756NM_001164766
ZFHX3hsa-miR-758-3p91.6557NM_001164766
ZFHX3hsa-miR-6892-5p91.4044NM_001164766
ZFHX3hsa-miR-4474-5p91.3826NM_001164766
ZFHX3hsa-miR-393691.3292NM_001164766
ZFHX3hsa-miR-16-5p91.2514NM_001164766
ZFHX3hsa-miR-195-5p91.2514NM_001164766
ZFHX3hsa-miR-15b-5p91.2514NM_001164766
ZFHX3hsa-miR-15a-5p91.2514NM_001164766
ZFHX3hsa-miR-374b-3p91.1159NM_001164766
ZFHX3hsa-miR-216a-3p91.1092NM_001164766
ZFHX3hsa-miR-128-3p91.1092NM_001164766
ZFHX3hsa-miR-1277-5p91.0954NM_001164766
ZFHX3hsa-miR-6838-5p91.0949NM_001164766
ZFHX3hsa-miR-497-5p91.0949NM_001164766
ZFHX3hsa-miR-424-5p91.0949NM_001164766
ZFHX3hsa-miR-138-2-3p91.0868NM_001164766
ZFHX3hsa-miR-4711-3p90.7794NM_001164766
ZFHX3hsa-miR-52790.7328NM_001164766
ZFHX3hsa-miR-518a-5p90.7328NM_001164766
ZFHX3hsa-miR-473990.7227NM_001164766
ZFHX3hsa-miR-5001-3p90.5945NM_001164766
ZFHX3hsa-miR-549a-3p90.4304NM_001164766
ZFHX3hsa-miR-548c-3p90.2167NM_001164766
ZFHX3hsa-miR-4701-5p90.1418NM_001164766
ZFHX3hsa-miR-58890.1418NM_001164766
ZFHX3hsa-miR-219b-3p89.7761NM_001164766
ZFHX3hsa-miR-508789.6281NM_001164766
ZFHX3hsa-miR-4524b-5p89.4778NM_001164766
ZFHX3hsa-miR-4524a-5p89.4778NM_001164766
ZFHX3hsa-miR-3160-5p89.477NM_001164766
ZFHX3hsa-miR-708-3p89.3646NM_001164766
ZFHX3hsa-miR-3619-5p89.3564NM_001164766
ZFHX3hsa-miR-129989.081NM_001164766
ZFHX3hsa-miR-130588.8567NM_001164766
ZFHX3hsa-miR-4727-5p88.8297NM_001164766
ZFHX3hsa-miR-4756-5p88.6748NM_001164766
ZFHX3hsa-miR-132188.6748NM_001164766
ZFHX3hsa-miR-4668-3p88.5587NM_001164766
ZFHX3hsa-miR-432488.442NM_001164766
ZFHX3hsa-miR-187-5p88.2402NM_001164766
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Motifs and transcription factors (TFs) regulating ZFHX3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ZFHX3hdpi__NFIXNFIX (directAnnotation).
ZFHX3transfac_pro__M03813POU3F3 (directAnnotation).
ZFHX3hocomoco__MNX1_HUMAN.H11MO.0.DMNX1 (directAnnotation).
ZFHX3hdpi__ZNF193ZSCAN9 (directAnnotation).
ZFHX3hdpi__FOXM1FOXM1 (directAnnotation).
ZFHX3hocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
ZFHX3transfac_pro__M05768ZNF544 (directAnnotation).
ZFHX3taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
ZFHX3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
ZFHX3transfac_pro__M07397ZNF148 (directAnnotation).
ZFHX3metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
ZFHX3metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
ZFHX3dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
ZFHX3taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
ZFHX3metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
ZFHX3metacluster_7.13ZFX (directAnnotation).
ZFHX3metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
ZFHX3homer__GGGGGGGG_MazMAZ (directAnnotation).
ZFHX3transfac_pro__M01175ZBTB7B (directAnnotation).
ZFHX3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
ZFHX3tfdimers__MD00151CHURC1 (directAnnotation).
ZFHX3metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
ZFHX3metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
ZFHX3transfac_pro__M01303SP1 (directAnnotation).
ZFHX3metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
ZFHX3swissregulon__hs__CHD1CHD1 (directAnnotation).
ZFHX3transfac_pro__M02090E2F4 (directAnnotation).
ZFHX3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
ZFHX3jaspar__MA1122.1TFDP1 (directAnnotation).
ZFHX3hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
ZFHX3transfac_pro__M02089E2F3 (directAnnotation).
ZFHX3metacluster_3.14WT1; WT1 (directAnnotation).
ZFHX3metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
ZFHX3metacluster_126.3LIN28B; LIN28B (directAnnotation).
ZFHX3hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
ZFHX3metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
ZFHX3cisbp__M07938E2F1 (directAnnotation).
ZFHX3kznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
ZFHX3homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
ZFHX3transfac_pro__M07436WT1 (directAnnotation).
ZFHX3transfac_pro__M02281SP1 (directAnnotation).
ZFHX3taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
ZFHX3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
ZFHX3metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
ZFHX3transfac_pro__M02898SMAD3 (directAnnotation).
ZFHX3transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
ZFHX3metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
ZFHX3taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
ZFHX3transfac_pro__M01783SP2 (directAnnotation).
ZFHX3metacluster_144.8ZNF30; ZNF30 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."