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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: VEGFA

Summary for VEGFA

Gene informationGene symbol

VEGFA

Ensembl ID

ENSG00000112715

Entrez ID

7422

Gene namevascular endothelial growth factor A
SynonymsVEGF|VEGF-A|VPF
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: VEGFA

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.5071.35e-14

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.7113420.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.963290.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.9028643.15e-18

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.9673143.21e-23

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro-0.2829993.78e-22

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells1.055160.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-1.008020.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.453554.78e-24

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Expression of VEGFA in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to VEGFA

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)
Gene symbolCell type with DEGInteraction IDInteracting pairGene AGene BIntegrinInteracting cell type1Interacting cell type2DatasetTimepointCondition
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroFibroblasts

GSE189460

preresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacropDCs

GSE189460

preresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroFibroblasts

GSE189460

presensitive
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroFibroblasts

GSE189460

presensitive
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacropDCs

GSE189460

presensitive
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseFibroblastsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseFibroblastsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMalignant cellsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMalignant cellsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMast cellsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMast cellsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroFibroblasts

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroFibroblasts

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroMalignant cells

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacropDCs

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseNeutrophilsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseNeutrophilsMono/Macro

GSE207422_Sin

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMalignant cellsMono/Macro

GSE207422_Sin

postsensitive
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMalignant cellsMono/Macro

GSE207422_Sin

postsensitive
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMast cellsMono/Macro

GSE207422_Sin

postsensitive
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMast cellsMono/Macro

GSE207422_Sin

postsensitive
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseFibroblastsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseFibroblastsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMalignant cellsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMalignant cellsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMast cellsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMast cellsMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS0C03F7CDCVEGFA_KDRVEGFAKDRFalseMono/MacroEndothelial cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS0B9B3870AVEGFA_FLT1VEGFAFLT1FalseMono/MacroEndothelial cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SC0AFC650CDVEGFA_FLT1_complexVEGFANAFalseMono/MacroEndothelial cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroEndothelial cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroEndothelial cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroFibroblasts

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroFibroblasts

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroMalignant cells

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMono/MacroMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacroMono/Macro

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMono/MacropDCs

GSE207422_Tor

postresistant
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMalignant cellsMono/Macro

GSE207422_Tor

postsensitive
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMalignant cellsMono/Macro

GSE207422_Tor

postsensitive
VEGFAMono/MacroCPI-SS046F8AD8BVEGFA_NRP2VEGFANRP2FalseMast cellsMono/Macro

GSE207422_Tor

postsensitive
VEGFAMono/MacroCPI-SS043E22BF5VEGFA_NRP1VEGFANRP1FalseMast cellsMono/Macro

GSE207422_Tor

postsensitive
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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

VEGFA

Regulation by the Disease Microenvironment

VEGFA

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating VEGFA

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
VEGFAhsa-miR-464887.7005NM_001171629
VEGFAhsa-miR-6748-5p87.5359NM_001171629
VEGFAhsa-miR-29787.4523NM_001171629
VEGFAhsa-miR-361-5p87.4068NM_001171629
VEGFAhsa-miR-129986.8892NM_001171627
VEGFAhsa-miR-427086.7622NM_001171629
VEGFAhsa-miR-684486.563NM_001171629
VEGFAhsa-miR-5580-3p86.3884NM_001171627
VEGFAhsa-miR-444185.7823NM_001171629
VEGFAhsa-miR-4766-3p84.9609NM_001171627
VEGFAhsa-miR-608384.5576NM_001171629
VEGFAhsa-miR-186-5p84.465NM_001171629
VEGFAhsa-miR-516b-5p83.9322NM_001171627
VEGFAhsa-miR-503-5p83.5032NM_001171627
VEGFAhsa-miR-6501-5p81.3695NM_001171629
VEGFAhsa-miR-361880.9051NM_001171627
VEGFAhsa-miR-140-5p80.5981NM_001171627
VEGFAhsa-miR-64680.1233NM_001171627
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Motifs and transcription factors (TFs) regulating VEGFA

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
VEGFAtaipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
VEGFAmetacluster_156.2ATF3; ATF4; ATF4; ATF4; ATF4; ATF4; ATF4; CEBPG; CEBPG; DDIT3; MYC (directAnnotation). ATF4; ATF4; ATF4; CEBPG; DDIT3 (inferredBy_Orthology).
VEGFAtransfac_pro__M06213ZNF267 (directAnnotation).
VEGFAtransfac_pro__M05788ZNF569 (inferredBy_Orthology).
VEGFAkznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
VEGFAjaspar__MA1125.1ZNF384 (directAnnotation).
VEGFAmetacluster_32.24ZNF287 (directAnnotation).
VEGFAmetacluster_22.39NFE2L2 (directAnnotation).
VEGFAkznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
VEGFAtfdimers__MD00069IKZF1; PDX1 (directAnnotation).
VEGFAmetacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
VEGFAtransfac_pro__M01973PLAG1 (directAnnotation).
VEGFAmetacluster_143.13ZBTB7A (directAnnotation).
VEGFAtransfac_pro__M07260IKZF1 (directAnnotation).
VEGFAtransfac_pro__M01835KLF4 (directAnnotation).
VEGFAhocomoco__PATZ1_HUMAN.H11MO.1.CPATZ1 (directAnnotation).
VEGFAswissregulon__hs__MTA3MTA3 (directAnnotation).
VEGFAnitta__CG18619_TCGAAG20NGA_KH_RTGACGTCAT_m1_c3uCREBL2 (inferredBy_Orthology).
VEGFAmetacluster_168.4ZNF652 (directAnnotation).
VEGFAtransfac_pro__M06550ZNF519 (directAnnotation).
VEGFAkznf__ZNF614_Imbeault2017_RP_ChIP-seqZNF614 (directAnnotation).
VEGFAswissregulon__hs__FOXD3FOXD3 (directAnnotation).
VEGFAmetacluster_172.22E4F1 (inferredBy_Orthology).
VEGFAtransfac_pro__M06388ZNF677 (directAnnotation).
VEGFAtfdimers__MD00299ETS1; SRY (directAnnotation).
VEGFAtransfac_pro__M06104ZNF16 (directAnnotation).
VEGFAtfdimers__MD00075FOXO4; NANOG (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
VEGFA"ABT-510"

DB05434

small molecule
VEGFA"Aflibercept"

DB08885

biotech
VEGFA"Bevacizumab"

DB00112

biotech
VEGFA"Bevasiranib"

DB06642

biotech
VEGFA"Brolucizumab"

DB14864

biotech
VEGFA"Carvedilol"

DB01136

small molecule
VEGFA"Chondroitin sulfate"

DB09301

small molecule
VEGFA"Dalteparin"

DB06779

small molecule
VEGFA"Denibulin"

DB05932

small molecule
VEGFA"Faricimab"

DB15303

biotech
VEGFA"Foreskin keratinocyte (neonatal)"

DB10772

biotech
VEGFA"Gliclazide"

DB01120

small molecule
VEGFA"Minocycline"

DB01017

small molecule
VEGFA"Pegaptanib"

DB04895

biotech
VEGFA"Pidolic acid"

DB03088

small molecule
VEGFA"Ranibizumab"

DB01270

biotech
VEGFA"SNS-032"

DB05969

small molecule
VEGFA"Vandetanib"

DB05294

small molecule
VEGFA"Vanucizumab"

DB12317

biotech
VEGFA"Veglin"

DB05890

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."