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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: UBE2W

Summary for UBE2W

Gene informationGene symbol

UBE2W

Ensembl ID

ENSG00000104343

Entrez ID

55284

Gene nameubiquitin conjugating enzyme E2 W
SynonymsFLJ11011|UBC-16
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: UBE2W

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.2781252.77e-23

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4691710.00e+00

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Expression of UBE2W in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to UBE2W

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating UBE2W

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
UBE2Whsa-miR-3156-3p90.1147NM_001001481
UBE2Whsa-miR-548j-3p89.9373NM_001001481
UBE2Whsa-miR-548aq-3p89.9373NM_001001481
UBE2Whsa-miR-548ah-3p89.9373NM_001001481
UBE2Whsa-miR-548am-3p89.9373NM_001001481
UBE2Whsa-miR-548ae-3p89.9373NM_001001481
UBE2Whsa-miR-335-3p89.9108NM_018299
UBE2Whsa-miR-89089.6992NM_018299
UBE2Whsa-miR-128-3p89.6657NM_001001481
UBE2Whsa-miR-216a-3p89.6657NM_001001481
UBE2Whsa-miR-548x-3p89.5128NM_001001481
UBE2Whsa-miR-548aj-3p89.5128NM_001001481
UBE2Whsa-miR-548m89.1775NM_018299
UBE2Whsa-miR-548n88.8286NM_001001481
UBE2Whsa-miR-451188.7936NM_001001481
UBE2Whsa-miR-30088.7464NM_001001481
UBE2Whsa-miR-381-3p88.7464NM_001001481
UBE2Whsa-miR-3681-3p88.5735NM_001001481
UBE2Whsa-miR-651-5p88.4422NM_018299
UBE2Whsa-miR-118488.3756NM_001001481
UBE2Whsa-miR-570688.1554NM_018299
UBE2Whsa-miR-4782-5p88.1554NM_018299
UBE2Whsa-miR-318288.1301NM_001001481
UBE2Whsa-miR-145-5p87.6523NM_001001481
UBE2Whsa-miR-5195-3p87.6523NM_001001481
UBE2Whsa-miR-364687.6485NM_018299
UBE2Whsa-miR-607487.1171NM_001001481
UBE2Whsa-miR-330-5p86.8153NM_018299
UBE2Whsa-miR-6819-5p85.9161NM_018299
UBE2Whsa-miR-6737-5p85.9161NM_018299
UBE2Whsa-miR-541-5p85.8714NM_018299
UBE2Whsa-miR-570-3p85.8429NM_001001481
UBE2Whsa-miR-95-5p85.7198NM_001001481
UBE2Whsa-miR-58685.5745NM_001001481
UBE2Whsa-miR-182785.5559NM_018299
UBE2Whsa-miR-227884.7845NM_018299
UBE2Whsa-miR-32684.7761NM_018299
UBE2Whsa-miR-1277-5p84.5266NM_001001481
UBE2Whsa-miR-3613-3p84.2123NM_001001481
UBE2Whsa-miR-6812-5p84.0271NM_018299
UBE2Whsa-miR-302c-5p83.9648NM_001001481
UBE2Whsa-miR-4756-5p83.7865NM_018299
UBE2Whsa-miR-132183.7865NM_018299
UBE2Whsa-miR-473983.6415NM_018299
UBE2Whsa-miR-5011-5p83.5609NM_018299
UBE2Whsa-miR-196a-1-3p83.2778NM_001001481
UBE2Whsa-miR-561-3p83.147NM_001001481
UBE2Whsa-miR-224-5p83.0818NM_001001481
UBE2Whsa-miR-429582.5141NM_001001481
UBE2Whsa-miR-442782.5102NM_018299
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Motifs and transcription factors (TFs) regulating UBE2W

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
UBE2Wmetacluster_135.11NR2C2 (directAnnotation).
UBE2Wmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
UBE2Wmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
UBE2Wmetacluster_7.13ZFX (directAnnotation).
UBE2Wkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
UBE2Wcisbp__M00968MTF2 (directAnnotation).
UBE2Wmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
UBE2Wmetacluster_160.20JUND; PRDM15 (directAnnotation).
UBE2Wcisbp__M00341PAX6 (directAnnotation).
UBE2Wmetacluster_198.3ZFP64 (directAnnotation).
UBE2Wmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
UBE2Wmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
UBE2Wjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
UBE2Wmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
UBE2Wcisbp__M00788ZFY (inferredBy_Orthology).
UBE2Wkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
UBE2Wmetacluster_175.1ZNF283 (directAnnotation).
UBE2Whdpi__ZNF304ZNF304 (directAnnotation).
UBE2Wtransfac_pro__M02844BCL6B (inferredBy_Orthology).
UBE2Wmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
UBE2Wmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
UBE2Wtransfac_pro__M01199TRIM28 (directAnnotation).
UBE2Wkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
UBE2Wmetacluster_151.2ZNF23 (directAnnotation).
UBE2Wtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
UBE2Wtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
UBE2Wtransfac_pro__M03806ZBTB7C (directAnnotation).
UBE2Wtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
UBE2Wmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
UBE2Wmetacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
UBE2Wtfdimers__MD00154MZF1; SREBF1 (directAnnotation).
UBE2Wcisbp__M00249WT1 (directAnnotation).
UBE2Wcisbp__M01863ZNF711 (inferredBy_Orthology).
UBE2Wtaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
UBE2Whomer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
UBE2Wtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
UBE2Wkznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."