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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRIM33

Summary for TRIM33

Gene informationGene symbol

TRIM33

Ensembl ID

ENSG00000197323

Entrez ID

51592

Gene nametripartite motif containing 33
SynonymsFLJ11429|KIAA1113|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA
Gene typeprotein_coding
UniProtAcc

Q9UPN9


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Dataset with differentially expressed gene: TRIM33

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3136452.29e-23

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2512120.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2535160.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3268640.00e+00

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Expression of TRIM33 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRIM33

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRIM33

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRIM33hsa-miR-548aw91.9264NM_015906
TRIM33hsa-miR-4776-3p91.9099NM_015906
TRIM33hsa-miR-446391.7939NM_015906
TRIM33hsa-miR-7162-3p91.4338NM_015906
TRIM33hsa-miR-46691.3837NM_015906
TRIM33hsa-miR-3682-5p91.1108NM_015906
TRIM33hsa-miR-312390.9496NM_015906
TRIM33hsa-miR-6839-3p90.7629NM_015906
TRIM33hsa-miR-545-3p90.747NM_015906
TRIM33hsa-miR-6830-5p90.4395NM_015906
TRIM33hsa-miR-513c-3p90.3346NM_015906
TRIM33hsa-miR-513a-3p90.3346NM_015906
TRIM33hsa-miR-431890.2591NM_015906
TRIM33hsa-miR-7856-5p90.0893NM_015906
TRIM33hsa-miR-409-3p89.0894NM_015906
TRIM33hsa-miR-466389.0468NM_015906
TRIM33hsa-miR-548n89.0153NM_015906
TRIM33hsa-miR-3129-3p88.9323NM_015906
TRIM33hsa-miR-5583-5p88.9323NM_015906
TRIM33hsa-miR-7151-3p88.6983NM_015906
TRIM33hsa-miR-6504-3p88.4054NM_015906
TRIM33hsa-miR-3606-3p88.0301NM_015906
TRIM33hsa-miR-316387.7499NM_015906
TRIM33hsa-miR-392487.4535NM_015906
TRIM33hsa-miR-451987.4214NM_015906
TRIM33hsa-miR-137-3p87.4043NM_015906
TRIM33hsa-miR-430387.0595NM_015906
TRIM33hsa-miR-548az-5p86.5356NM_015906
TRIM33hsa-miR-548t-5p86.5356NM_015906
TRIM33hsa-miR-455-5p86.5324NM_015906
TRIM33hsa-miR-370-3p86.1385NM_015906
TRIM33hsa-miR-6893-3p86.1385NM_015906
TRIM33hsa-miR-20b-3p86.0884NM_015906
TRIM33hsa-miR-4786-5p86.0012NM_015906
TRIM33hsa-miR-477385.6734NM_015906
TRIM33hsa-miR-10399-5p85.3938NM_015906
TRIM33hsa-miR-1277-5p85.3933NM_015906
TRIM33hsa-miR-525-5p85.2305NM_015906
TRIM33hsa-miR-520a-5p85.2305NM_015906
TRIM33hsa-miR-888-5p85.1176NM_015906
TRIM33hsa-miR-391485.0272NM_015906
TRIM33hsa-miR-211784.6621NM_015906
TRIM33hsa-miR-568084.6522NM_015906
TRIM33hsa-miR-63384.3134NM_015906
TRIM33hsa-miR-129984.0297NM_015906
TRIM33hsa-miR-5579-3p83.9691NM_015906
TRIM33hsa-miR-64083.6747NM_015906
TRIM33hsa-miR-451783.2103NM_015906
TRIM33hsa-miR-94083.2022NM_015906
TRIM33hsa-miR-6893-5p83.2022NM_015906
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Motifs and transcription factors (TFs) regulating TRIM33

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRIM33metacluster_151.2ZNF23 (directAnnotation).
TRIM33transfac_pro__M05479ZNF580 (directAnnotation).
TRIM33metacluster_144.3ZNF704; ZNF704 (directAnnotation).
TRIM33hdpi__ETV4ETV4 (directAnnotation).
TRIM33transfac_pro__M06071ZNF814 (directAnnotation).
TRIM33homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
TRIM33metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
TRIM33transfac_pro__M04826EP300 (directAnnotation).
TRIM33metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
TRIM33dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
TRIM33transfac_pro__M04950EGR1 (directAnnotation).
TRIM33metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
TRIM33taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
TRIM33transfac_pro__M00652NRF1 (directAnnotation).
TRIM33taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TRIM33metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
TRIM33metacluster_144.8ZNF30; ZNF30 (directAnnotation).
TRIM33transfac_pro__M04918EGR1 (directAnnotation).
TRIM33taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
TRIM33kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
TRIM33transfac_pro__M01122ZNF219 (directAnnotation).
TRIM33taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
TRIM33dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
TRIM33taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TRIM33kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
TRIM33metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
TRIM33dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
TRIM33jaspar__MA1721.1ZNF93 (directAnnotation).
TRIM33taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
TRIM33transfac_pro__M01199TRIM28 (directAnnotation).
TRIM33tfdimers__MD00391KLF4 (directAnnotation).
TRIM33metacluster_126.3LIN28B; LIN28B (directAnnotation).
TRIM33cisbp__M00968MTF2 (directAnnotation).
TRIM33transfac_pro__M12697ZNF142 (directAnnotation).
TRIM33taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TRIM33kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
TRIM33kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
TRIM33metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."