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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TRAF3

Summary for TRAF3

Gene informationGene symbol

TRAF3

Ensembl ID

ENSG00000131323

Entrez ID

7187

Gene nameTNF receptor associated factor 3
SynonymsCAP-1|CD40bp|CRAF1|LAP1|RNF118
Gene typeprotein_coding
UniProtAcc

Q13114


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Dataset with differentially expressed gene: TRAF3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3177240.00e+00

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Expression of TRAF3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TRAF3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TRAF3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TRAF3hsa-miR-320a-5p85.8414NM_001199427
TRAF3hsa-miR-124-3p85.8328NM_001199427
TRAF3hsa-miR-506-3p85.8328NM_001199427
TRAF3hsa-miR-808685.8074NM_001199427
TRAF3hsa-miR-124-5p85.5475NM_001199427
TRAF3hsa-miR-510-3p85.4915NM_001199427
TRAF3hsa-miR-301b-5p85.4782NM_001199427
TRAF3hsa-miR-301a-5p85.4782NM_001199427
TRAF3hsa-miR-430685.179NM_001199427
TRAF3hsa-miR-432584.9537NM_001199427
TRAF3hsa-miR-6719-3p84.8789NM_001199427
TRAF3hsa-miR-628-5p84.4687NM_001199427
TRAF3hsa-miR-971884.4687NM_001199427
TRAF3hsa-miR-3927-5p84.3251NM_001199427
TRAF3hsa-miR-6730-3p84.1447NM_001199427
TRAF3hsa-miR-6825-5p83.8187NM_001199427
TRAF3hsa-miR-130383.6562NM_001199427
TRAF3hsa-miR-6721-5p83.4941NM_001199427
TRAF3hsa-miR-3620-5p83.4595NM_001199427
TRAF3hsa-miR-653-3p83.4319NM_001199427
TRAF3hsa-miR-317882.6472NM_001199427
TRAF3hsa-miR-34b-3p82.4205NM_001199427
TRAF3hsa-miR-426782.3056NM_001199427
TRAF3hsa-miR-158782.281NM_001199427
TRAF3hsa-miR-10394-3p82.2383NM_001199427
TRAF3hsa-miR-137-3p82.0694NM_001199427
TRAF3hsa-miR-76181.8885NM_001199427
TRAF3hsa-miR-317981.4847NM_001199427
TRAF3hsa-miR-27a-3p81.2523NM_001199427
TRAF3hsa-miR-998581.2523NM_001199427
TRAF3hsa-miR-27b-3p81.2523NM_001199427
TRAF3hsa-miR-1227-5p80.952NM_001199427
TRAF3hsa-miR-4659a-3p80.9236NM_001199427
TRAF3hsa-miR-4659b-3p80.9236NM_001199427
TRAF3hsa-miR-94480.8761NM_001199427
TRAF3hsa-miR-3619-5p80.7242NM_001199427
TRAF3hsa-miR-1915-3p80.5614NM_001199427
TRAF3hsa-miR-214-3p80.2027NM_001199427
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Motifs and transcription factors (TFs) regulating TRAF3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TRAF3metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
TRAF3transfac_pro__M04950EGR1 (directAnnotation).
TRAF3taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
TRAF3taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
TRAF3transfac_pro__M00652NRF1 (directAnnotation).
TRAF3taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
TRAF3transfac_pro__M04866HDAC2 (directAnnotation).
TRAF3jaspar__MA1122.1TFDP1 (directAnnotation).
TRAF3swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."