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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: TET1

Summary for TET1

Gene informationGene symbol

TET1

Ensembl ID

ENSG00000138336

Entrez ID

80312

Gene nametet methylcytosine dioxygenase 1
SynonymsbA119F7.1|CXXC6|KIAA1676|LCX
Gene typeprotein_coding
UniProtAcc

Q8NFU7


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Dataset with differentially expressed gene: TET1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.329490.00e+00

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Expression of TET1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to TET1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating TET1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
TET1hsa-miR-7153-3p90.0819NM_030625
TET1hsa-miR-593-5p89.7622NM_030625
TET1hsa-miR-2681-5p89.6062NM_030625
TET1hsa-miR-302e89.0274NM_030625
TET1hsa-miR-6835-3p88.9676NM_030625
TET1hsa-miR-1212288.7728NM_030625
TET1hsa-miR-520c-3p88.6679NM_030625
TET1hsa-miR-520d-3p88.6679NM_030625
TET1hsa-miR-302b-3p88.6679NM_030625
TET1hsa-miR-302d-3p88.6679NM_030625
TET1hsa-miR-302a-3p88.6679NM_030625
TET1hsa-miR-372-3p88.6679NM_030625
TET1hsa-miR-302c-3p88.6679NM_030625
TET1hsa-miR-520a-3p88.6679NM_030625
TET1hsa-miR-520b-3p88.6679NM_030625
TET1hsa-miR-373-3p88.6679NM_030625
TET1hsa-miR-520e-3p88.6679NM_030625
TET1hsa-miR-498-5p88.3277NM_030625
TET1hsa-miR-6809-3p88.3031NM_030625
TET1hsa-miR-1211987.7505NM_030625
TET1hsa-miR-506-3p87.4207NM_030625
TET1hsa-miR-124-3p87.4207NM_030625
TET1hsa-miR-3680-3p87.3865NM_030625
TET1hsa-miR-526b-3p87.2173NM_030625
TET1hsa-miR-6885-3p87.101NM_030625
TET1hsa-miR-429986.6999NM_030625
TET1hsa-miR-548c-3p85.6874NM_030625
TET1hsa-miR-60785.6586NM_030625
TET1hsa-miR-539-5p85.5834NM_030625
TET1hsa-miR-548an85.4286NM_030625
TET1hsa-miR-998585.2293NM_030625
TET1hsa-miR-27b-3p85.2293NM_030625
TET1hsa-miR-27a-3p85.2293NM_030625
TET1hsa-miR-367184.9765NM_030625
TET1hsa-miR-509-3-5p83.7188NM_030625
TET1hsa-miR-509-5p83.7188NM_030625
TET1hsa-miR-95-5p83.7091NM_030625
TET1hsa-miR-6511b-5p83.6151NM_030625
TET1hsa-miR-6811-5p83.6151NM_030625
TET1hsa-miR-196a-1-3p83.4629NM_030625
TET1hsa-miR-580-5p83.0304NM_030625
TET1hsa-miR-188-3p82.5206NM_030625
TET1hsa-miR-392382.4824NM_030625
TET1hsa-miR-471982.361NM_030625
TET1hsa-miR-365882.3437NM_030625
TET1hsa-miR-499b-5p82.1541NM_030625
TET1hsa-miR-361-5p81.743NM_030625
TET1hsa-miR-675-3p81.563NM_030625
TET1hsa-miR-208a-5p81.2561NM_030625
TET1hsa-miR-208b-5p81.2561NM_030625
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Motifs and transcription factors (TFs) regulating TET1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
TET1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
TET1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
TET1transfac_pro__M07397ZNF148 (directAnnotation).
TET1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
TET1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
TET1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
TET1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
TET1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
TET1metacluster_7.13ZFX (directAnnotation).
TET1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
TET1homer__GGGGGGGG_MazMAZ (directAnnotation).
TET1transfac_pro__M01175ZBTB7B (directAnnotation).
TET1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
TET1tfdimers__MD00151CHURC1 (directAnnotation).
TET1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
TET1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
TET1transfac_pro__M01303SP1 (directAnnotation).
TET1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
TET1swissregulon__hs__CHD1CHD1 (directAnnotation).
TET1transfac_pro__M02090E2F4 (directAnnotation).
TET1transfac_pro__M01714KLF15 (directAnnotation).
TET1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
TET1hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
TET1transfac_pro__M02089E2F3 (directAnnotation).
TET1metacluster_3.14WT1; WT1 (directAnnotation).
TET1metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
TET1metacluster_126.3LIN28B; LIN28B (directAnnotation).
TET1hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
TET1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
TET1cisbp__M07938E2F1 (directAnnotation).
TET1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
TET1transfac_pro__M07436WT1 (directAnnotation).
TET1transfac_pro__M02281SP1 (directAnnotation).
TET1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
TET1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
TET1metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
TET1transfac_pro__M02898SMAD3 (directAnnotation).
TET1transfac_public__M00491PATZ1 (directAnnotation).
TET1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
TET1metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."