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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SYT4

Summary for SYT4

Gene informationGene symbol

SYT4

Ensembl ID

ENSG00000132872

Entrez ID

6860

Gene namesynaptotagmin 4
SynonymsHsT1192|KIAA1342
Gene typeprotein_coding
UniProtAcc

Q9H2B2


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Dataset with differentially expressed gene: SYT4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.568720.00e+00

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Expression of SYT4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SYT4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SYT4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SYT4hsa-miR-4670-3p85.2821NM_020783
SYT4hsa-miR-1213684.9888NM_020783
SYT4hsa-miR-424-5p84.9343NM_020783
SYT4hsa-miR-513c-3p84.8802NM_020783
SYT4hsa-miR-513a-3p84.8802NM_020783
SYT4hsa-miR-1250-3p84.2705NM_020783
SYT4hsa-miR-6793-3p83.9054NM_020783
SYT4hsa-miR-129-1-3p83.8565NM_020783
SYT4hsa-miR-129-2-3p83.8565NM_020783
SYT4hsa-miR-548e-5p83.8012NM_020783
SYT4hsa-miR-5584-5p83.4172NM_020783
SYT4hsa-miR-1915-5p83.142NM_020783
SYT4hsa-miR-655-5p83.134NM_020783
SYT4hsa-miR-5589-3p82.6944NM_020783
SYT4hsa-miR-15b-5p82.3332NM_020783
SYT4hsa-miR-15a-5p82.3332NM_020783
SYT4hsa-miR-6838-5p82.3332NM_020783
SYT4hsa-miR-195-5p82.3332NM_020783
SYT4hsa-miR-497-5p82.3332NM_020783
SYT4hsa-miR-16-5p82.3332NM_020783
SYT4hsa-miR-335-3p82.2364NM_020783
SYT4hsa-miR-516a-3p81.8598NM_020783
SYT4hsa-miR-7162-5p81.8598NM_020783
SYT4hsa-miR-516b-3p81.8598NM_020783
SYT4hsa-miR-3613-3p81.2296NM_020783
SYT4hsa-miR-23b-3p81.1334NM_020783
SYT4hsa-miR-23a-3p81.1334NM_020783
SYT4hsa-miR-23c81.1334NM_020783
SYT4hsa-miR-520e-5p81.0919NM_020783
SYT4hsa-miR-22-5p81.0381NM_020783
SYT4hsa-miR-3606-3p80.9558NM_020783
SYT4hsa-miR-449580.875NM_020783
SYT4hsa-miR-998680.7814NM_020783
SYT4hsa-miR-129480.7814NM_020783
SYT4hsa-miR-196a-1-3p80.73NM_020783
SYT4hsa-miR-4716-5p80.4605NM_020783
SYT4hsa-miR-806880.326NM_020783
SYT4hsa-miR-205-3p80.0655NM_020783
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Motifs and transcription factors (TFs) regulating SYT4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."