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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: STK39

Summary for STK39

Gene informationGene symbol

STK39

Ensembl ID

ENSG00000198648

Entrez ID

27347

Gene nameserine/threonine kinase 39
SynonymsDCHT|SPAK
Gene typeprotein_coding
UniProtAcc

Q9UEW8


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Dataset with differentially expressed gene: STK39

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3309610.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.479330.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3543493.00e-15

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Expression of STK39 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to STK39

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating STK39

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
STK39hsa-miR-428285.7652NM_013233
STK39hsa-miR-6885-3p85.3065NM_013233
STK39hsa-miR-190a-3p85.1782NM_013233
STK39hsa-miR-27b-3p85.1216NM_013233
STK39hsa-miR-27a-3p85.1216NM_013233
STK39hsa-miR-998585.1216NM_013233
STK39hsa-miR-55884.8478NM_013233
STK39hsa-miR-22-3p84.1887NM_013233
STK39hsa-miR-196a-1-3p83.8101NM_013233
STK39hsa-miR-7106-5p83.6174NM_013233
STK39hsa-miR-806383.3443NM_013233
STK39hsa-miR-365982.6878NM_013233
STK39hsa-miR-323a-3p82.576NM_013233
STK39hsa-miR-312382.5462NM_013233
STK39hsa-miR-548ar-3p81.7505NM_013233
STK39hsa-miR-6516-5p81.5788NM_013233
STK39hsa-miR-1306-5p81.414NM_013233
STK39hsa-miR-367280.5975NM_013233
STK39hsa-miR-6864-3p80.5975NM_013233
STK39hsa-miR-548e-3p80.3616NM_013233
STK39hsa-miR-548f-3p80.3616NM_013233
STK39hsa-miR-548az-3p80.3616NM_013233
STK39hsa-miR-548a-3p80.3616NM_013233
STK39hsa-miR-548bc80.3616NM_013233
STK39hsa-miR-548l80.3192NM_013233
STK39hsa-miR-20680.2946NM_013233
STK39hsa-miR-1-3p80.2946NM_013233
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Motifs and transcription factors (TFs) regulating STK39

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
STK39taipale_tf_pairs__ATF4_TEF_RNMTGATGCAATN_CAPATF4; TEF (directAnnotation).
STK39taipale_tf_pairs__ATF4_CEBPD_NGATGATGCAATNN_CAPATF4; CEBPD (directAnnotation).
STK39metacluster_35.7HINFP (inferredBy_Orthology).
STK39metacluster_135.11NR2C2 (directAnnotation).
STK39metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
STK39metacluster_144.3ZNF704; ZNF704 (directAnnotation).
STK39metacluster_7.13ZFX (directAnnotation).
STK39kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
STK39cisbp__M00968MTF2 (directAnnotation).
STK39metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
STK39metacluster_160.20JUND; PRDM15 (directAnnotation).
STK39cisbp__M00341PAX6 (directAnnotation).
STK39metacluster_198.3ZFP64 (directAnnotation).
STK39metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
STK39metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
STK39metacluster_61.1DEAF1; DEAF1 (directAnnotation).
STK39cisbp__M00788ZFY (inferredBy_Orthology).
STK39kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
STK39metacluster_175.1ZNF283 (directAnnotation).
STK39hdpi__ZNF304ZNF304 (directAnnotation).
STK39transfac_pro__M02844BCL6B (inferredBy_Orthology).
STK39metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
STK39metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
STK39transfac_pro__M01199TRIM28 (directAnnotation).
STK39transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
STK39transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
STK39transfac_pro__M03806ZBTB7C (directAnnotation).
STK39transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
STK39kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
STK39taipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
STK39transfac_pro__M02089E2F3 (directAnnotation).
STK39taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
STK39transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
STK39transfac_pro__M04817ZBTB33 (directAnnotation).
STK39tfdimers__MD00483ZBTB14 (directAnnotation).
STK39cisbp__M07938E2F1 (directAnnotation).
STK39jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
STK39metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
STK39metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
STK39taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
STK39jaspar__MA1122.1TFDP1 (directAnnotation).
STK39taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
STK39"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."