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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SPOPL

Summary for SPOPL

Gene informationGene symbol

SPOPL

Ensembl ID

ENSG00000144228

Entrez ID

339745

Gene namespeckle type BTB/POZ protein like
SynonymsBTBD33
Gene typeprotein_coding
UniProtAcc

Q6IQ16


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Dataset with differentially expressed gene: SPOPL

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.2999228.88e-19

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5618050.00e+00

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Expression of SPOPL in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SPOPL

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SPOPL

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SPOPLhsa-miR-141-3p89.7601NM_001001664
SPOPLhsa-miR-200a-3p89.7601NM_001001664
SPOPLhsa-let-7b-3p89.6442NM_001001664
SPOPLhsa-let-7a-3p89.6442NM_001001664
SPOPLhsa-miR-98-3p89.6442NM_001001664
SPOPLhsa-let-7f-1-3p89.6442NM_001001664
SPOPLhsa-miR-519d-5p89.5775NM_001001664
SPOPLhsa-miR-4762-3p89.3873NM_001001664
SPOPLhsa-miR-590-3p89.2974NM_001001664
SPOPLhsa-miR-442288.7546NM_001001664
SPOPLhsa-miR-450b-5p88.6317NM_001001664
SPOPLhsa-miR-4477b88.5657NM_001001664
SPOPLhsa-miR-223-5p88.4553NM_001001664
SPOPLhsa-miR-7114-5p87.9328NM_001001664
SPOPLhsa-miR-217-3p87.8827NM_001001664
SPOPLhsa-miR-49287.8813NM_001001664
SPOPLhsa-miR-4713-5p87.8159NM_001001664
SPOPLhsa-miR-392487.5689NM_001001664
SPOPLhsa-miR-848587.3342NM_001001664
SPOPLhsa-miR-203a-3p87.3286NM_001001664
SPOPLhsa-miR-584-5p87.1567NM_001001664
SPOPLhsa-miR-548t-5p87.0833NM_001001664
SPOPLhsa-miR-548az-5p87.0833NM_001001664
SPOPLhsa-miR-374b-5p87.0802NM_001001664
SPOPLhsa-miR-6845-3p87.0701NM_001001664
SPOPLhsa-miR-144-3p87.0145NM_001001664
SPOPLhsa-miR-205386.9846NM_001001664
SPOPLhsa-miR-569686.7117NM_001001664
SPOPLhsa-miR-4789-5p86.6706NM_001001664
SPOPLhsa-miR-1250-3p86.5796NM_001001664
SPOPLhsa-miR-6882-5p86.3754NM_001001664
SPOPLhsa-miR-797585.9796NM_001001664
SPOPLhsa-miR-56885.5756NM_001001664
SPOPLhsa-miR-7856-5p85.3576NM_001001664
SPOPLhsa-miR-6768-5p84.9732NM_001001664
SPOPLhsa-miR-427784.928NM_001001664
SPOPLhsa-miR-150-5p84.7945NM_001001664
SPOPLhsa-miR-429184.7921NM_001001664
SPOPLhsa-miR-500a-5p84.476NM_001001664
SPOPLhsa-miR-548ar-3p84.0621NM_001001664
SPOPLhsa-miR-3691-3p83.9535NM_001001664
SPOPLhsa-miR-4520-3p83.5921NM_001001664
SPOPLhsa-miR-3616-5p83.5691NM_001001664
SPOPLhsa-miR-57383.5691NM_001001664
SPOPLhsa-miR-10522-5p82.5207NM_001001664
SPOPLhsa-miR-548l82.2568NM_001001664
SPOPLhsa-miR-20a-3p81.8743NM_001001664
SPOPLhsa-miR-548a-3p81.7194NM_001001664
SPOPLhsa-miR-548f-3p81.7194NM_001001664
SPOPLhsa-miR-548e-3p81.7194NM_001001664
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Motifs and transcription factors (TFs) regulating SPOPL

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SPOPLtaipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
SPOPLdbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
SPOPLswissregulon__hs__CHD1CHD1 (directAnnotation).
SPOPLmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SPOPLtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
SPOPLkznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
SPOPLtransfac_pro__M12686ZBTB10 (directAnnotation).
SPOPLtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
SPOPLmetacluster_143.14ZNF320 (directAnnotation).
SPOPLkznf__ZNF383_Imbeault2017_RP_RCADEZNF383 (directAnnotation).
SPOPLdbtfbs__ZBTB10_HEK293_ENCSR004PLU_merged_N1ZBTB10 (directAnnotation).
SPOPLmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
SPOPLtaipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
SPOPLmetacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
SPOPLmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
SPOPLkznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
SPOPLkznf__ZNF141_Imbeault2017_RP_RCADEZNF141 (directAnnotation).
SPOPLtransfac_pro__M04617ZBTB7A (directAnnotation).
SPOPLtransfac_pro__M01973PLAG1 (directAnnotation).
SPOPLmetacluster_151.2ZNF23 (directAnnotation).
SPOPLmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
SPOPLtaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
SPOPLmetacluster_66.1MTF1; ZNF320; ZNF320; ZNF320; ZNF782 (directAnnotation).
SPOPLcisbp__M01864EGR1 (inferredBy_Orthology).
SPOPLtfdimers__MD00391KLF4 (directAnnotation).
SPOPLkznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
SPOPLtfdimers__MD00151CHURC1 (directAnnotation).
SPOPLtransfac_pro__M04817ZBTB33 (directAnnotation).
SPOPLcisbp__M00139ZNF281 (inferredBy_Orthology).
SPOPLtaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
SPOPLmetacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
SPOPLtransfac_public__M00491PATZ1 (directAnnotation).
SPOPLtaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
SPOPLmetacluster_3.10KLF2; KLF4 (directAnnotation).
SPOPLjaspar__MA1122.1TFDP1 (directAnnotation).
SPOPLkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
SPOPLtransfac_pro__M01253CNOT3 (directAnnotation).
SPOPLmetacluster_159.5ZIC1; ZIC4; ZNF423 (directAnnotation). SP1 (inferredBy_Orthology).
SPOPLcisbp__M00968MTF2 (directAnnotation).
SPOPLtfdimers__MD00038TFAP2C (directAnnotation).
SPOPLmetacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
SPOPLtransfac_pro__M01199TRIM28 (directAnnotation).
SPOPLmetacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
SPOPLmetacluster_3.14WT1; WT1 (directAnnotation).
SPOPLtransfac_pro__M12697ZNF142 (directAnnotation).
SPOPLmetacluster_84.2RARA (directAnnotation).
SPOPLtransfac_pro__M01122ZNF219 (directAnnotation).
SPOPLtransfac_pro__M07387ZBTB7A (directAnnotation).
SPOPLmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SPOPLtransfac_pro__M04893TAF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."