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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SOS2

Summary for SOS2

Gene informationGene symbol

SOS2

Ensembl ID

ENSG00000100485

Entrez ID

6655

Gene nameSOS Ras/Rho guanine nucleotide exchange factor 2
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q07890


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Dataset with differentially expressed gene: SOS2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3013394.51e-22

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Expression of SOS2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SOS2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SOS2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SOS2hsa-miR-6835-3p89.4864NM_006939
SOS2hsa-miR-5582-5p88.9528NM_006939
SOS2hsa-miR-383-3p88.6675NM_006939
SOS2hsa-miR-892b88.1314NM_006939
SOS2hsa-miR-30a-3p87.978NM_006939
SOS2hsa-miR-30d-3p87.978NM_006939
SOS2hsa-miR-30e-3p87.978NM_006939
SOS2hsa-miR-317687.7327NM_006939
SOS2hsa-miR-3922-3p87.7327NM_006939
SOS2hsa-miR-429187.2137NM_006939
SOS2hsa-miR-199a-3p87.1129NM_006939
SOS2hsa-miR-199b-3p87.1129NM_006939
SOS2hsa-miR-93687.1129NM_006939
SOS2hsa-miR-3129-5p87.1129NM_006939
SOS2hsa-miR-548v86.8999NM_006939
SOS2hsa-miR-224-5p86.7062NM_006939
SOS2hsa-miR-98-3p86.083NM_006939
SOS2hsa-let-7b-3p86.083NM_006939
SOS2hsa-let-7f-1-3p86.083NM_006939
SOS2hsa-let-7a-3p86.083NM_006939
SOS2hsa-miR-6765-3p85.6113NM_006939
SOS2hsa-miR-4717-5p85.4348NM_006939
SOS2hsa-miR-6890-3p85.3483NM_006939
SOS2hsa-miR-338-5p84.6919NM_006939
SOS2hsa-miR-1213684.3509NM_006939
SOS2hsa-miR-3619-5p83.5765NM_006939
SOS2hsa-miR-154-5p82.4334NM_006939
SOS2hsa-miR-392080.9067NM_006939
SOS2hsa-miR-19b-3p80.437NM_006939
SOS2hsa-miR-19a-3p80.437NM_006939
SOS2hsa-miR-590-5p80.2773NM_006939
SOS2hsa-miR-21-5p80.2773NM_006939
SOS2hsa-miR-1295b-3p80.2302NM_006939
SOS2hsa-miR-3617-5p80.2182NM_006939
SOS2hsa-miR-64180.2182NM_006939
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Motifs and transcription factors (TFs) regulating SOS2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SOS2metacluster_135.11NR2C2 (directAnnotation).
SOS2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SOS2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SOS2metacluster_7.13ZFX (directAnnotation).
SOS2kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
SOS2cisbp__M00968MTF2 (directAnnotation).
SOS2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SOS2metacluster_198.3ZFP64 (directAnnotation).
SOS2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SOS2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
SOS2jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SOS2metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SOS2cisbp__M00788ZFY (inferredBy_Orthology).
SOS2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SOS2metacluster_175.1ZNF283 (directAnnotation).
SOS2hdpi__ZNF304ZNF304 (directAnnotation).
SOS2transfac_pro__M02844BCL6B (inferredBy_Orthology).
SOS2metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SOS2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SOS2transfac_pro__M01199TRIM28 (directAnnotation).
SOS2kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SOS2metacluster_151.2ZNF23 (directAnnotation).
SOS2transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
SOS2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
SOS2transfac_pro__M03806ZBTB7C (directAnnotation).
SOS2transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."