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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SNX18

Summary for SNX18

Gene informationGene symbol

SNX18

Ensembl ID

ENSG00000178996

Entrez ID

112574

Gene namesorting nexin 18
SynonymsSH3PX2|SH3PXD3B|SNAG1
Gene typeprotein_coding
UniProtAcc

Q96RF0


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Dataset with differentially expressed gene: SNX18

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.325682.12e-05

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-0.5665372.82e-03

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4914420.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4196872.82e-39

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Expression of SNX18 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SNX18

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SNX18

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SNX18hsa-miR-190a-3p87.3706NM_001102575
SNX18hsa-miR-469887.2601NM_001102575
SNX18hsa-miR-1213686.4294NM_001145427
SNX18hsa-miR-500b-5p86.1806NM_001102575
SNX18hsa-miR-362-5p86.1806NM_001102575
SNX18hsa-miR-338-3p85.7588NM_001145427
SNX18hsa-miR-569385.733NM_001145427
SNX18hsa-miR-6806-5p85.5955NM_001145427
SNX18hsa-miR-6811-5p85.1509NM_052870
SNX18hsa-miR-6511b-5p85.1509NM_052870
SNX18hsa-miR-607184.8264NM_001102575
SNX18hsa-miR-568984.7635NM_001102575
SNX18hsa-miR-467984.5597NM_001145427
SNX18hsa-miR-6502-5p83.9928NM_001102575
SNX18hsa-miR-1301-5p83.9928NM_001102575
SNX18hsa-miR-6511b-3p83.9542NM_001145427
SNX18hsa-miR-6511a-3p83.9542NM_001145427
SNX18hsa-miR-314883.656NM_001145427
SNX18hsa-miR-320283.6084NM_052870
SNX18hsa-miR-5582-5p83.6009NM_001145427
SNX18hsa-miR-6833-3p83.4408NM_001145427
SNX18hsa-miR-513a-5p83.3499NM_052870
SNX18hsa-miR-125a-5p83.2097NM_001145427
SNX18hsa-miR-431983.2097NM_001145427
SNX18hsa-miR-128-3p83.0087NM_001145427
SNX18hsa-miR-30a-3p82.8512NM_052870
SNX18hsa-miR-30d-3p82.8512NM_052870
SNX18hsa-miR-30e-3p82.8512NM_052870
SNX18hsa-miR-10a-5p82.7117NM_001102575
SNX18hsa-miR-10b-5p82.7117NM_001102575
SNX18hsa-miR-548x-3p81.8732NM_001102575
SNX18hsa-miR-548aj-3p81.8732NM_001102575
SNX18hsa-miR-93481.8391NM_052870
SNX18hsa-miR-519381.5251NM_001145427
SNX18hsa-miR-5002-5p81.4614NM_001145427
SNX18hsa-miR-216a-3p81.2541NM_001145427
SNX18hsa-miR-125b-5p80.6902NM_001145427
SNX18hsa-miR-4793-3p80.4366NM_001145427
SNX18hsa-miR-449980.2816NM_052870
SNX18hsa-miR-94480.1274NM_001102575
SNX18hsa-miR-548n80.0683NM_001102575
SNX18hsa-miR-4732-3p80.0207NM_001145427
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Motifs and transcription factors (TFs) regulating SNX18

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SNX18kznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
SNX18kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
SNX18transfac_pro__M04617ZBTB7A (directAnnotation).
SNX18taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
SNX18transfac_pro__M07387ZBTB7A (directAnnotation).
SNX18transfac_pro__M00716ZBTB14 (directAnnotation).
SNX18transfac_pro__M04893TAF1 (directAnnotation).
SNX18metacluster_135.11NR2C2 (directAnnotation).
SNX18metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SNX18metacluster_7.13ZFX (directAnnotation).
SNX18cisbp__M00968MTF2 (directAnnotation).
SNX18metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SNX18metacluster_160.20JUND; PRDM15 (directAnnotation).
SNX18metacluster_198.3ZFP64 (directAnnotation).
SNX18metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SNX18jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SNX18metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SNX18cisbp__M00788ZFY (inferredBy_Orthology).
SNX18kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SNX18hdpi__ZNF304ZNF304 (directAnnotation).
SNX18transfac_pro__M01199TRIM28 (directAnnotation).
SNX18metacluster_151.2ZNF23 (directAnnotation).
SNX18transfac_pro__M03806ZBTB7C (directAnnotation).
SNX18kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
SNX18kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
SNX18kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
SNX18dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
SNX18dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
SNX18taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
SNX18transfac_pro__M01253CNOT3 (directAnnotation).
SNX18flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
SNX18taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
SNX18jaspar__MA0748.2YY2 (directAnnotation).
SNX18kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
SNX18idmmpmm__MadSMAD9 (inferredBy_Orthology).
SNX18homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
SNX18transfac_pro__M01090SMAD9 (inferredBy_Orthology).
SNX18cisbp__M01863ZNF711 (inferredBy_Orthology).
SNX18jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
SNX18transfac_pro__M00938E2F1 (directAnnotation).
SNX18transfac_pro__M04817ZBTB33 (directAnnotation).
SNX18transfac_pro__M01088DEAF1 (inferredBy_Orthology).
SNX18transfac_pro__M12697ZNF142 (directAnnotation).
SNX18metacluster_175.1ZNF283 (directAnnotation).
SNX18tfdimers__MD00364WT1 (directAnnotation).
SNX18transfac_pro__M02786PLAGL1 (inferredBy_Orthology).
SNX18transfac_pro__M01973PLAG1 (directAnnotation).
SNX18metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
SNX18tfdimers__MD00483ZBTB14 (directAnnotation).
SNX18transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."