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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: SMAD2

Summary for SMAD2

Gene informationGene symbol

SMAD2

Ensembl ID

ENSG00000175387

Entrez ID

4087

Gene nameSMAD family member 2
SynonymsJV18-1|MADH2|MADR2
Gene typeprotein_coding
UniProtAcc

Q15796


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Dataset with differentially expressed gene: SMAD2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3372480.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3124538.30e-43

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.472830.00e+00

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Expression of SMAD2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SMAD2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SMAD2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SMAD2hsa-miR-6716-5p85.362NM_001003652
SMAD2hsa-miR-6731-5p85.2736NM_001003652
SMAD2hsa-miR-808585.2736NM_001003652
SMAD2hsa-miR-3065-5p85.2193NM_001003652
SMAD2hsa-miR-607485.1982NM_001003652
SMAD2hsa-miR-450a-1-3p84.9266NM_001003652
SMAD2hsa-miR-430584.85NM_001003652
SMAD2hsa-miR-34c-3p84.8284NM_001003652
SMAD2hsa-miR-3692-5p84.5396NM_001003652
SMAD2hsa-miR-548c-3p84.3189NM_001003652
SMAD2hsa-miR-767-3p84.2472NM_001003652
SMAD2hsa-miR-391984.2281NM_001003652
SMAD2hsa-miR-3913-3p83.8142NM_001003652
SMAD2hsa-miR-429883.7749NM_001003652
SMAD2hsa-miR-374b-5p83.5815NM_001003652
SMAD2hsa-miR-950083.5593NM_001003652
SMAD2hsa-miR-367183.3288NM_001003652
SMAD2hsa-miR-93-3p83.3209NM_001003652
SMAD2hsa-miR-3942-3p83.203NM_001003652
SMAD2hsa-miR-365a-5p83.1341NM_001003652
SMAD2hsa-miR-365b-5p83.1341NM_001003652
SMAD2hsa-miR-4724-3p82.7277NM_001003652
SMAD2hsa-miR-409-3p82.1368NM_001003652
SMAD2hsa-miR-769-5p82.0117NM_001003652
SMAD2hsa-miR-497-3p81.9112NM_001003652
SMAD2hsa-miR-5692c81.8614NM_001003652
SMAD2hsa-miR-5692b81.8614NM_001003652
SMAD2hsa-miR-522-3p81.8501NM_001003652
SMAD2hsa-miR-224-3p81.8501NM_001003652
SMAD2hsa-miR-548ag81.6844NM_001003652
SMAD2hsa-miR-548ai81.6844NM_001003652
SMAD2hsa-miR-570-5p81.6844NM_001003652
SMAD2hsa-miR-548ba81.6844NM_001003652
SMAD2hsa-miR-6792-5p81.6596NM_001003652
SMAD2hsa-miR-103a-2-5p81.0367NM_001003652
SMAD2hsa-miR-103a-1-5p81.0367NM_001003652
SMAD2hsa-miR-477381.0292NM_001003652
SMAD2hsa-miR-302d-5p80.9762NM_001003652
SMAD2hsa-miR-302b-5p80.9762NM_001003652
SMAD2hsa-miR-18a-5p80.8716NM_001003652
SMAD2hsa-miR-18b-5p80.8716NM_001003652
SMAD2hsa-miR-4735-3p80.8481NM_001003652
SMAD2hsa-miR-190b-3p80.8192NM_001003652
SMAD2hsa-miR-1213680.7721NM_001003652
SMAD2hsa-miR-30e-3p80.4114NM_001003652
SMAD2hsa-miR-30a-3p80.4114NM_001003652
SMAD2hsa-miR-30d-3p80.4114NM_001003652
SMAD2hsa-miR-5584-5p80.2829NM_001003652
SMAD2hsa-miR-216a-3p80.2392NM_001003652
SMAD2hsa-miR-128-3p80.2392NM_001003652
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Motifs and transcription factors (TFs) regulating SMAD2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SMAD2metacluster_7.13ZFX (directAnnotation).
SMAD2metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
SMAD2metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
SMAD2cisbp__M01863ZNF711 (inferredBy_Orthology).
SMAD2taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
SMAD2metacluster_151.2ZNF23 (directAnnotation).
SMAD2metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
SMAD2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
SMAD2kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
SMAD2metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SMAD2metacluster_182.10ZFX (directAnnotation).
SMAD2hdpi__ETV4ETV4 (directAnnotation).
SMAD2jaspar__MA0748.2YY2 (directAnnotation).
SMAD2transfac_pro__M05628ZNF735 (directAnnotation).
SMAD2homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
SMAD2metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SMAD2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
SMAD2jaspar__MA0079.5SP1 (directAnnotation).
SMAD2taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
SMAD2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
SMAD2transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
SMAD2transfac_pro__M07397ZNF148 (directAnnotation).
SMAD2metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
SMAD2metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
SMAD2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
SMAD2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
SMAD2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
SMAD2homer__GGGGGGGG_MazMAZ (directAnnotation).
SMAD2transfac_pro__M01175ZBTB7B (directAnnotation).
SMAD2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
SMAD2tfdimers__MD00151CHURC1 (directAnnotation).
SMAD2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
SMAD2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
SMAD2transfac_pro__M01303SP1 (directAnnotation).
SMAD2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SMAD2swissregulon__hs__CHD1CHD1 (directAnnotation).
SMAD2transfac_pro__M02090E2F4 (directAnnotation).
SMAD2transfac_pro__M01714KLF15 (directAnnotation).
SMAD2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
SMAD2jaspar__MA1122.1TFDP1 (directAnnotation).
SMAD2hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
SMAD2transfac_pro__M02089E2F3 (directAnnotation).
SMAD2transfac_pro__M12604ZNF444 (directAnnotation).
SMAD2metacluster_3.14WT1; WT1 (directAnnotation).
SMAD2metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
SMAD2metacluster_126.3LIN28B; LIN28B (directAnnotation).
SMAD2hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
SMAD2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
SMAD2cisbp__M07938E2F1 (directAnnotation).
SMAD2kznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
SMAD2"Dexfosfoserine"

DB04522

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."