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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SGPP1

Summary for SGPP1

Gene informationGene symbol

SGPP1

Ensembl ID

ENSG00000285281

Entrez ID

81537

Gene namesphingosine-1-phosphate phosphatase 1
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q9BX95


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Dataset with differentially expressed gene: SGPP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4709310.00e+00

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Expression of SGPP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SGPP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SGPP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SGPP1hsa-miR-3688-3p87.5906NM_030791
SGPP1hsa-miR-3606-3p87.198NM_030791
SGPP1hsa-miR-34c-5p86.0631NM_030791
SGPP1hsa-miR-449b-5p86.0631NM_030791
SGPP1hsa-miR-410-3p85.6507NM_030791
SGPP1hsa-miR-548g-5p85.459NM_030791
SGPP1hsa-miR-548f-5p85.459NM_030791
SGPP1hsa-miR-548aj-5p85.459NM_030791
SGPP1hsa-miR-548x-5p85.459NM_030791
SGPP1hsa-miR-4680-3p85.0262NM_030791
SGPP1hsa-miR-126-5p84.9047NM_030791
SGPP1hsa-miR-548an84.6765NM_030791
SGPP1hsa-miR-2115-3p84.21NM_030791
SGPP1hsa-miR-556-5p84.0637NM_030791
SGPP1hsa-miR-4795-3p83.7244NM_030791
SGPP1hsa-miR-551b-5p83.5836NM_030791
SGPP1hsa-miR-316382.8115NM_030791
SGPP1hsa-miR-432582.6563NM_030791
SGPP1hsa-miR-2116-3p82.4513NM_030791
SGPP1hsa-miR-561-3p81.7343NM_030791
SGPP1hsa-miR-379-5p81.0271NM_030791
SGPP1hsa-miR-3529-5p81.0271NM_030791
SGPP1hsa-miR-411-3p80.6365NM_030791
SGPP1hsa-miR-379-3p80.6365NM_030791
SGPP1hsa-miR-451480.6145NM_030791
SGPP1hsa-miR-469280.6145NM_030791
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Motifs and transcription factors (TFs) regulating SGPP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SGPP1metacluster_135.11NR2C2 (directAnnotation).
SGPP1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SGPP1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
SGPP1cisbp__M00968MTF2 (directAnnotation).
SGPP1metacluster_160.20JUND; PRDM15 (directAnnotation).
SGPP1cisbp__M00341PAX6 (directAnnotation).
SGPP1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
SGPP1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SGPP1cisbp__M00788ZFY (inferredBy_Orthology).
SGPP1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
SGPP1metacluster_175.1ZNF283 (directAnnotation).
SGPP1hdpi__ZNF304ZNF304 (directAnnotation).
SGPP1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
SGPP1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
SGPP1transfac_pro__M01199TRIM28 (directAnnotation).
SGPP1metacluster_151.2ZNF23 (directAnnotation).
SGPP1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."