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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SERINC5

Summary for SERINC5

Gene informationGene symbol

SERINC5

Ensembl ID

ENSG00000164300

Entrez ID

256987

Gene nameserine incorporator 5
SynonymsC5orf12|TPO1
Gene typeprotein_coding
UniProtAcc

Q86VE9


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Dataset with differentially expressed gene: SERINC5

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.4436190.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3010051.64e-12

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3760531.41e-40

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Expression of SERINC5 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SERINC5

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SERINC5

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SERINC5hsa-miR-548j-5p86.3906NM_001174072
SERINC5hsa-miR-548h-5p86.3906NM_001174072
SERINC5hsa-miR-548as-5p86.3906NM_001174072
SERINC5hsa-miR-548ak86.3906NM_001174072
SERINC5hsa-miR-548ae-5p86.3906NM_001174072
SERINC5hsa-miR-548ap-5p86.3906NM_001174072
SERINC5hsa-miR-548au-5p86.3906NM_001174072
SERINC5hsa-miR-548a-5p86.3906NM_001174072
SERINC5hsa-miR-548w86.3906NM_001174072
SERINC5hsa-miR-548b-5p86.3906NM_001174072
SERINC5hsa-miR-548ar-5p86.3906NM_001174072
SERINC5hsa-miR-548ad-5p86.3906NM_001174072
SERINC5hsa-miR-548bb-5p86.3906NM_001174072
SERINC5hsa-miR-548am-5p86.3906NM_001174072
SERINC5hsa-miR-548c-5p86.3906NM_001174072
SERINC5hsa-miR-548ay-5p86.3906NM_001174072
SERINC5hsa-miR-548y86.3906NM_001174072
SERINC5hsa-miR-548ab86.3906NM_001174072
SERINC5hsa-miR-548aq-5p86.3906NM_001174072
SERINC5hsa-miR-548bc85.6827NM_001174072
SERINC5hsa-miR-548f-3p85.6827NM_001174072
SERINC5hsa-miR-548e-3p85.6827NM_001174072
SERINC5hsa-miR-548a-3p85.6626NM_001174072
SERINC5hsa-miR-450b-5p84.9438NM_001174072
SERINC5hsa-miR-25-3p84.7909NM_001174072
SERINC5hsa-miR-29b-3p84.6536NM_001174072
SERINC5hsa-miR-29c-3p84.6536NM_001174072
SERINC5hsa-miR-29a-3p84.6536NM_001174072
SERINC5hsa-miR-140-3p84.6039NM_001174072
SERINC5hsa-miR-570-3p84.3105NM_001174072
SERINC5hsa-miR-9-5p84.1312NM_001174072
SERINC5hsa-miR-92a-3p83.6852NM_001174072
SERINC5hsa-miR-32-5p83.6852NM_001174072
SERINC5hsa-miR-92b-3p83.6852NM_001174072
SERINC5hsa-miR-498-3p83.1835NM_001174072
SERINC5hsa-miR-6511a-5p83.1437NM_001174072
SERINC5hsa-miR-316382.8734NM_001174072
SERINC5hsa-miR-3913-5p82.0153NM_001174072
SERINC5hsa-miR-18b-3p81.6321NM_001174072
SERINC5hsa-miR-561-3p81.2763NM_001174072
SERINC5hsa-miR-18a-3p80.9613NM_001174072
SERINC5hsa-miR-548an80.6379NM_001174072
SERINC5hsa-miR-200c-5p80.5097NM_001174071
SERINC5hsa-miR-550a-3p80.5097NM_001174071
SERINC5hsa-miR-509480.2563NM_001174072
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Motifs and transcription factors (TFs) regulating SERINC5

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SERINC5metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
SERINC5taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
SERINC5metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
SERINC5transfac_public__M00024E2F1 (directAnnotation).
SERINC5swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
SERINC5taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
SERINC5jaspar__MA1933.1SREBF2 (directAnnotation).
SERINC5taipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
SERINC5taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
SERINC5taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
SERINC5taipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
SERINC5transfac_pro__M01298MECP2 (directAnnotation).
SERINC5metacluster_135.11NR2C2 (directAnnotation).
SERINC5metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
SERINC5cisbp__M00968MTF2 (directAnnotation).
SERINC5metacluster_160.20JUND; PRDM15 (directAnnotation).
SERINC5metacluster_198.3ZFP64 (directAnnotation).
SERINC5jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
SERINC5metacluster_61.1DEAF1; DEAF1 (directAnnotation).
SERINC5metacluster_175.1ZNF283 (directAnnotation).
SERINC5hdpi__ZNF304ZNF304 (directAnnotation).
SERINC5kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
SERINC5transfac_pro__M03806ZBTB7C (directAnnotation).
SERINC5transfac_pro__M02933ZBTB14 (inferredBy_Orthology).
SERINC5metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
SERINC5transfac_pro__M07317CTBP1 (directAnnotation).
SERINC5transfac_pro__M12697ZNF142 (directAnnotation).
SERINC5taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
SERINC5transfac_pro__M01090SMAD9 (inferredBy_Orthology).
SERINC5transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
SERINC5jaspar__MA1650.1ZBTB14 (directAnnotation).
SERINC5transfac_pro__M01088DEAF1 (inferredBy_Orthology).
SERINC5metacluster_45.4E2F2 (directAnnotation).
SERINC5taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
SERINC5metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
SERINC5kznf__ZNF2_Imbeault2017_RP_ChIP-seqZNF2 (directAnnotation).
SERINC5transfac_pro__M09837ZNF449 (directAnnotation).
SERINC5hdpi__GTF3C2GTF3C2 (directAnnotation).
SERINC5transfac_pro__M08005TCFL5 (inferredBy_Orthology).
SERINC5swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
SERINC5kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
SERINC5taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."