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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: SEMA3A

Summary for SEMA3A

Gene informationGene symbol

SEMA3A

Ensembl ID

ENSG00000075213

Entrez ID

10371

Gene namesemaphorin 3A
Synonymscoll-1|Hsema-I|SEMA1|SEMAD|SemD
Gene typeprotein_coding
UniProtAcc

Q14563


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Dataset with differentially expressed gene: SEMA3A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells3.241835.35e-07

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Expression of SEMA3A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to SEMA3A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating SEMA3A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
SEMA3Ahsa-miR-629-3p90.1029NM_006080
SEMA3Ahsa-miR-150-5p90.0768NM_006080
SEMA3Ahsa-miR-424-5p89.8355NM_006080
SEMA3Ahsa-miR-223-5p89.8251NM_006080
SEMA3Ahsa-miR-58689.3973NM_006080
SEMA3Ahsa-miR-6807-3p89.3153NM_006080
SEMA3Ahsa-miR-497-5p89.2277NM_006080
SEMA3Ahsa-miR-4709-3p89.1118NM_006080
SEMA3Ahsa-miR-222-5p89.0098NM_006080
SEMA3Ahsa-miR-1211988.4594NM_006080
SEMA3Ahsa-miR-320b88.4015NM_006080
SEMA3Ahsa-miR-442988.4015NM_006080
SEMA3Ahsa-miR-320c88.4015NM_006080
SEMA3Ahsa-miR-320d88.4015NM_006080
SEMA3Ahsa-miR-320a-3p88.4015NM_006080
SEMA3Ahsa-miR-130a-5p88.3268NM_006080
SEMA3Ahsa-miR-5581-3p88.1589NM_006080
SEMA3Ahsa-miR-3617-5p87.7109NM_006080
SEMA3Ahsa-miR-64187.7109NM_006080
SEMA3Ahsa-miR-3692-3p87.4024NM_006080
SEMA3Ahsa-miR-3605-5p87.1239NM_006080
SEMA3Ahsa-miR-4680-3p86.976NM_006080
SEMA3Ahsa-miR-196b-5p86.8238NM_006080
SEMA3Ahsa-miR-6831-5p86.8238NM_006080
SEMA3Ahsa-miR-196a-5p86.8238NM_006080
SEMA3Ahsa-miR-568486.7264NM_006080
SEMA3Ahsa-miR-3927-3p86.5538NM_006080
SEMA3Ahsa-miR-608386.4344NM_006080
SEMA3Ahsa-miR-494-3p86.2362NM_006080
SEMA3Ahsa-miR-4760-5p85.5732NM_006080
SEMA3Ahsa-miR-316385.46NM_006080
SEMA3Ahsa-miR-511-3p85.2491NM_006080
SEMA3Ahsa-miR-25-3p85.014NM_006080
SEMA3Ahsa-miR-367-3p85.014NM_006080
SEMA3Ahsa-miR-363-3p85.014NM_006080
SEMA3Ahsa-miR-372-5p84.6211NM_006080
SEMA3Ahsa-miR-430784.3356NM_006080
SEMA3Ahsa-miR-203a-3p84.1183NM_006080
SEMA3Ahsa-miR-6833-3p84.0001NM_006080
SEMA3Ahsa-miR-30e-5p82.6059NM_006080
SEMA3Ahsa-miR-30d-5p82.6059NM_006080
SEMA3Ahsa-miR-30a-5p82.6059NM_006080
SEMA3Ahsa-miR-30b-5p82.6059NM_006080
SEMA3Ahsa-miR-30c-5p82.6059NM_006080
SEMA3Ahsa-miR-477582.2012NM_006080
SEMA3Ahsa-miR-442482.1417NM_006080
SEMA3Ahsa-miR-499a-5p82.1147NM_006080
SEMA3Ahsa-miR-3925-3p82.0631NM_006080
SEMA3Ahsa-miR-93681.8778NM_006080
SEMA3Ahsa-miR-33a-5p81.7745NM_006080
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Motifs and transcription factors (TFs) regulating SEMA3A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
SEMA3Ahocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."