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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RNF217

Summary for RNF217

Gene informationGene symbol

RNF217

Ensembl ID

ENSG00000146373

Entrez ID

154214

Gene namering finger protein 217
SynonymsC6orf172|dJ84N20.1|IBRDC1|MGC26996
Gene typeprotein_coding
UniProtAcc

Q8TC41


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Dataset with differentially expressed gene: RNF217

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.318243.21e-14

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Expression of RNF217 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RNF217

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RNF217

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RNF217hsa-miR-430787.1233NM_001286398
RNF217hsa-miR-57887.1112NM_152553
RNF217hsa-miR-477587.0739NM_152553
RNF217hsa-miR-335-3p86.6934NM_152553
RNF217hsa-miR-374c-5p86.6928NM_001286398
RNF217hsa-miR-6507-5p86.6225NM_152553
RNF217hsa-miR-806886.6218NM_001286398
RNF217hsa-miR-32-3p86.6197NM_152553
RNF217hsa-miR-442786.5424NM_001286398
RNF217hsa-miR-9-3p86.2964NM_001286398
RNF217hsa-miR-520d-5p85.9289NM_001286398
RNF217hsa-miR-7850-5p85.4782NM_001286398
RNF217hsa-miR-806184.9026NM_001286398
RNF217hsa-miR-55984.7065NM_001286398
RNF217hsa-miR-655-3p84.5092NM_001286398
RNF217hsa-miR-548j-3p84.3201NM_001286398
RNF217hsa-miR-548ae-3p84.3201NM_001286398
RNF217hsa-miR-548aq-3p84.3201NM_001286398
RNF217hsa-miR-450484.3105NM_001286398
RNF217hsa-miR-5692a84.0998NM_152553
RNF217hsa-miR-450b-5p84.0356NM_001286398
RNF217hsa-miR-526b-5p83.9428NM_152553
RNF217hsa-miR-524-5p83.0324NM_001286398
RNF217hsa-miR-4796-3p82.944NM_152553
RNF217hsa-miR-1277-5p82.8047NM_001286398
RNF217hsa-miR-6730-3p82.7581NM_001286398
RNF217hsa-miR-5579-3p82.4511NM_001286398
RNF217hsa-miR-4760-5p82.3555NM_001286398
RNF217hsa-miR-582-3p82.1998NM_001286398
RNF217hsa-miR-548ar-3p82.1909NM_001286398
RNF217hsa-miR-807081.8205NM_152553
RNF217hsa-miR-445781.806NM_001286398
RNF217hsa-miR-340-5p81.7785NM_152553
RNF217hsa-miR-889-3p81.6589NM_001286398
RNF217hsa-miR-3613-3p81.6207NM_001286398
RNF217hsa-miR-194-5p81.3477NM_001286398
RNF217hsa-miR-548am-3p81.2953NM_001286398
RNF217hsa-miR-548ah-3p81.2953NM_001286398
RNF217hsa-miR-5582-3p81.1864NM_001286398
RNF217hsa-miR-548ak81.1762NM_001286398
RNF217hsa-miR-548c-5p81.1762NM_001286398
RNF217hsa-miR-548i81.1762NM_001286398
RNF217hsa-miR-548a-5p81.1762NM_001286398
RNF217hsa-miR-548ab81.1762NM_001286398
RNF217hsa-miR-548b-5p81.1762NM_001286398
RNF217hsa-miR-548o-5p81.1762NM_001286398
RNF217hsa-miR-548bb-5p81.1762NM_001286398
RNF217hsa-miR-548j-5p81.1762NM_001286398
RNF217hsa-miR-548au-5p81.1762NM_001286398
RNF217hsa-miR-548ar-5p81.1762NM_001286398
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Motifs and transcription factors (TFs) regulating RNF217

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RNF217metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RNF217taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
RNF217transfac_pro__M00652NRF1 (directAnnotation).
RNF217transfac_pro__M04918EGR1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."