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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RIMS2

Summary for RIMS2

Gene informationGene symbol

RIMS2

Ensembl ID

ENSG00000176406

Entrez ID

9699

Gene nameregulating synaptic membrane exocytosis 2
SynonymsKIAA0751|OBOE|RAB3IP3|RIM2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: RIMS2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.6047020.00e+00

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Expression of RIMS2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RIMS2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RIMS2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RIMS2hsa-miR-134-3p89.746NM_001100117
RIMS2hsa-miR-92b-3p89.6852NM_001100117
RIMS2hsa-miR-92a-3p89.6852NM_001100117
RIMS2hsa-miR-32-5p89.6852NM_001100117
RIMS2hsa-miR-548ap-3p89.5522NM_001282882
RIMS2hsa-miR-548aa89.5522NM_001282882
RIMS2hsa-miR-548t-3p89.5522NM_001282882
RIMS2hsa-miR-477589.4654NM_001100117
RIMS2hsa-miR-314989.1415NM_001282882
RIMS2hsa-miR-6855-5p88.9933NM_001282882
RIMS2hsa-miR-29a-5p88.8168NM_001100117
RIMS2hsa-miR-367-3p88.8028NM_001100117
RIMS2hsa-miR-363-3p88.8028NM_001100117
RIMS2hsa-miR-25-3p88.8028NM_001100117
RIMS2hsa-miR-684488.7706NM_001100117
RIMS2hsa-miR-576-3p88.7041NM_001100117
RIMS2hsa-miR-5584-3p88.6749NM_001100117
RIMS2hsa-miR-200b-3p87.9765NM_001100117
RIMS2hsa-miR-200c-3p87.9765NM_001100117
RIMS2hsa-miR-3613-3p87.7788NM_001282882
RIMS2hsa-miR-516b-3p87.7142NM_001282882
RIMS2hsa-miR-516a-3p87.7142NM_001282882
RIMS2hsa-miR-7162-5p87.7142NM_001282882
RIMS2hsa-miR-6853-3p87.5558NM_001282882
RIMS2hsa-miR-6872-3p87.075NM_001100117
RIMS2hsa-miR-653-5p86.9604NM_001282882
RIMS2hsa-miR-445286.8939NM_001100117
RIMS2hsa-miR-367186.679NM_001282882
RIMS2hsa-miR-9983-3p86.6722NM_001282882
RIMS2hsa-miR-317086.198NM_001282882
RIMS2hsa-miR-6879-5p86.1195NM_001100117
RIMS2hsa-miR-4761-3p86.1195NM_001100117
RIMS2hsa-miR-4436b-3p86.1195NM_001100117
RIMS2hsa-miR-7843-5p86.1195NM_001100117
RIMS2hsa-miR-6735-5p86.1195NM_001100117
RIMS2hsa-miR-453985.9058NM_001282882
RIMS2hsa-miR-1211385.9058NM_001282882
RIMS2hsa-miR-42985.7902NM_001100117
RIMS2hsa-miR-134-5p85.4606NM_001100117
RIMS2hsa-miR-311885.4606NM_001100117
RIMS2hsa-miR-767-5p85.3683NM_001100117
RIMS2hsa-miR-3606-5p85.287NM_001100117
RIMS2hsa-miR-1212985.2031NM_001100117
RIMS2hsa-miR-6753-5p84.9203NM_001100117
RIMS2hsa-miR-4755-5p84.8196NM_001100117
RIMS2hsa-miR-5006-3p84.8196NM_001100117
RIMS2hsa-miR-7156-3p84.7052NM_001282882
RIMS2hsa-miR-6884-3p84.3417NM_001100117
RIMS2hsa-miR-129-5p84.3206NM_001282882
RIMS2hsa-miR-1212284.1439NM_001100117
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Motifs and transcription factors (TFs) regulating RIMS2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RIMS2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RIMS2taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
RIMS2transfac_pro__M00652NRF1 (directAnnotation).
RIMS2transfac_pro__M01298MECP2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."