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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: REST

Summary for REST

Gene informationGene symbol

REST

Ensembl ID

ENSG00000084093

Entrez ID

5978

Gene nameRE1 silencing transcription factor
SynonymsDFNA27|NRSF|XBR
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: REST

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3917110.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2854796.89e-15

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3243620.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3535821.98e-33

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Expression of REST in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to REST

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating REST

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RESThsa-miR-3065-5p90.256NM_001193508
RESThsa-miR-453189.5366NM_001193508
RESThsa-miR-449589.3284NM_001193508
RESThsa-miR-942-3p88.8969NM_001193508
RESThsa-miR-302c-5p88.456NM_001193508
RESThsa-miR-548a-3p88.3829NM_001193508
RESThsa-miR-548az-3p88.1866NM_001193508
RESThsa-miR-548bc88.1866NM_001193508
RESThsa-miR-548f-3p88.1866NM_001193508
RESThsa-miR-548e-3p88.1866NM_001193508
RESThsa-miR-548ar-3p88.0083NM_001193508
RESThsa-miR-366287.9651NM_001193508
RESThsa-miR-302e87.413NM_001193508
RESThsa-miR-806387.3036NM_001193508
RESThsa-miR-330-3p86.3498NM_001193508
RESThsa-miR-302a-3p86.2131NM_001193508
RESThsa-miR-373-3p86.2131NM_001193508
RESThsa-miR-520d-3p86.2131NM_001193508
RESThsa-miR-372-3p86.2131NM_001193508
RESThsa-miR-302d-3p86.2131NM_001193508
RESThsa-miR-520b-3p86.2131NM_001193508
RESThsa-miR-520a-3p86.2131NM_001193508
RESThsa-miR-520e-3p86.2131NM_001193508
RESThsa-miR-302b-3p86.2131NM_001193508
RESThsa-miR-302c-3p86.2131NM_001193508
RESThsa-miR-520c-3p86.2131NM_001193508
RESThsa-miR-4753-3p86.1805NM_001193508
RESThsa-miR-1269b85.9221NM_001193508
RESThsa-miR-1269a85.9221NM_001193508
RESThsa-miR-428285.7889NM_001193508
RESThsa-miR-651-5p85.3975NM_001193508
RESThsa-miR-340-5p85.1076NM_001193508
RESThsa-miR-142-5p84.9932NM_001193508
RESThsa-miR-5590-3p84.9932NM_001193508
RESThsa-miR-676-5p84.5892NM_001193508
RESThsa-miR-770383.7355NM_001193508
RESThsa-miR-432583.7355NM_001193508
RESThsa-miR-508783.5668NM_001193508
RESThsa-miR-9-5p82.7073NM_001193508
RESThsa-miR-19a-3p82.4387NM_001193508
RESThsa-miR-19b-3p82.4387NM_001193508
RESThsa-miR-217-5p82.3588NM_001193508
RESThsa-miR-95-5p82.2205NM_001193508
RESThsa-miR-4720-3p82.0857NM_001193508
RESThsa-miR-6807-3p81.9496NM_001193508
RESThsa-miR-128481.5393NM_001193508
RESThsa-miR-5588-5p81.3862NM_001193508
RESThsa-miR-4799-3p81.3862NM_001193508
RESThsa-miR-4720-5p81.3862NM_001193508
RESThsa-miR-499a-5p81.2685NM_001193508
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Motifs and transcription factors (TFs) regulating REST

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RESTmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
RESTmetacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
RESTtaipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
RESTtransfac_pro__M04826EP300 (directAnnotation).
RESTmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RESTtaipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
RESTtransfac_pro__M00652NRF1 (directAnnotation).
RESThdpi__ETV4ETV4 (directAnnotation).
RESTdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
RESTtaipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
RESTtaipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
RESTjaspar__MA1933.1SREBF2 (directAnnotation).
RESTcisbp__M08198ELF1 (directAnnotation).
RESTdbtfbs__ZNF121_HEK293_ENCSR224QDY_merged_N3ZNF121 (directAnnotation).
RESTmetacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
RESTtaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
RESTtaipale_tf_pairs__ELK1_EOMES_RSCGGAANNAGGYGYNA_CAP_reprELK1; EOMES (directAnnotation).
RESTtaipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
RESTjaspar__MA1957.1ELK1 (directAnnotation).
RESTtransfac_pro__M06331ZNF343 (directAnnotation).
RESTmetacluster_135.11NR2C2 (directAnnotation).
RESTmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
RESTtfdimers__MD00038TFAP2C (directAnnotation).
RESTmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
RESTmetacluster_7.13ZFX (directAnnotation).
RESTkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
RESTcisbp__M00968MTF2 (directAnnotation).
RESTmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
RESTcisbp__M00341PAX6 (directAnnotation).
RESTmetacluster_198.3ZFP64 (directAnnotation).
RESTmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
RESTjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
RESTmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
RESTcisbp__M00788ZFY (inferredBy_Orthology).
RESThdpi__ZNF304ZNF304 (directAnnotation).
RESTtransfac_pro__M02844BCL6B (inferredBy_Orthology).
RESTmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
RESTmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
RESTtransfac_pro__M01199TRIM28 (directAnnotation).
RESTkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
RESTmetacluster_151.2ZNF23 (directAnnotation).
RESTtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RESTtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
RESTtransfac_pro__M03806ZBTB7C (directAnnotation).
RESTtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RESTtransfac_pro__M01090SMAD9 (inferredBy_Orthology).
RESTflyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
RESTmetacluster_126.3LIN28B; LIN28B (directAnnotation).
RESTtransfac_pro__M04893TAF1 (directAnnotation).
RESThdpi__HIP2UBE2K (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."