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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RC3H1

Summary for RC3H1

Gene informationGene symbol

RC3H1

Ensembl ID

ENSG00000135870

Entrez ID

149041

Gene namering finger and CCCH-type domains 1
SynonymsKIAA2025|RNF198|roquin|RP5-1198E17.5
Gene typeprotein_coding
UniProtAcc

Q5TC82


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Dataset with differentially expressed gene: RC3H1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.4589070.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.2611720.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.342692.16e-34

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Expression of RC3H1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RC3H1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RC3H1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RC3H1hsa-miR-548as-5p96.6945NM_001300851
RC3H1hsa-miR-548am-5p96.6945NM_001300851
RC3H1hsa-miR-548ay-5p96.6945NM_001300851
RC3H1hsa-miR-548a-5p96.6945NM_001300851
RC3H1hsa-miR-548i96.6945NM_001300851
RC3H1hsa-miR-428296.3879NM_001300850
RC3H1hsa-miR-548aq-5p96.2119NM_001300851
RC3H1hsa-miR-98-3p95.8954NM_001300850
RC3H1hsa-let-7f-1-3p95.8954NM_001300850
RC3H1hsa-let-7b-3p95.8954NM_001300850
RC3H1hsa-let-7a-3p95.8954NM_001300850
RC3H1hsa-miR-561-3p95.2335NM_001300851
RC3H1hsa-miR-472995.1767NM_001300850
RC3H1hsa-miR-5692b95.1412NM_001300851
RC3H1hsa-miR-5692c95.1412NM_001300851
RC3H1hsa-miR-7-1-3p95.1327NM_001300851
RC3H1hsa-miR-145-5p95.0795NM_001300850
RC3H1hsa-miR-5195-3p95.0795NM_001300850
RC3H1hsa-miR-369-3p95.0011NM_001300851
RC3H1hsa-miR-477594.862NM_001300851
RC3H1hsa-miR-4735-5p94.7512NM_001300851
RC3H1hsa-miR-548at-5p94.6282NM_001300850
RC3H1hsa-miR-6845-3p94.5844NM_001300851
RC3H1hsa-miR-1185-1-3p94.365NM_001300850
RC3H1hsa-let-7f-2-3p94.365NM_001300850
RC3H1hsa-miR-1185-2-3p94.365NM_001300850
RC3H1hsa-miR-7-2-3p94.2695NM_001300851
RC3H1hsa-miR-142-5p94.1578NM_001300851
RC3H1hsa-miR-5590-3p94.1578NM_001300851
RC3H1hsa-miR-513c-5p94.1331NM_001300851
RC3H1hsa-miR-312594.0567NM_001300850
RC3H1hsa-miR-651-3p94.0013NM_001300851
RC3H1hsa-miR-3192-3p93.9511NM_001300850
RC3H1hsa-miR-10527-5p93.8933NM_001300850
RC3H1hsa-miR-410-3p93.7617NM_001300850
RC3H1hsa-miR-216a-5p93.6972NM_001300851
RC3H1hsa-miR-60893.6922NM_001300851
RC3H1hsa-miR-465193.6922NM_001300851
RC3H1hsa-miR-1277-5p93.6834NM_001300851
RC3H1hsa-miR-4668-5p93.3578NM_001300851
RC3H1hsa-miR-391693.2477NM_001300850
RC3H1hsa-miR-6859-5p93.2477NM_001300850
RC3H1hsa-miR-608193.0844NM_001300850
RC3H1hsa-miR-576-5p92.6265NM_001300851
RC3H1hsa-miR-514b-5p92.4734NM_001300851
RC3H1hsa-miR-368592.4144NM_001300851
RC3H1hsa-miR-469891.8899NM_001300850
RC3H1hsa-miR-427691.6081NM_001300850
RC3H1hsa-miR-3160-5p91.6004NM_001300851
RC3H1hsa-miR-5692a91.5681NM_001300851
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Motifs and transcription factors (TFs) regulating RC3H1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."