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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: RAB10

Summary for RAB10

Gene informationGene symbol

RAB10

Ensembl ID

ENSG00000084733

Entrez ID

10890

Gene nameRAB10, member RAS oncogene family
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P61026


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Dataset with differentially expressed gene: RAB10

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4876230.00e+00

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.350211.56e-22

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-0.269440.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.3534190.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4137279.07e-40

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Expression of RAB10 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to RAB10

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating RAB10

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
RAB10hsa-miR-2355-3p87.854NM_016131
RAB10hsa-miR-313387.7646NM_016131
RAB10hsa-miR-2115-5p87.6137NM_016131
RAB10hsa-miR-196a-1-3p87.4113NM_016131
RAB10hsa-miR-6815-5p87.346NM_016131
RAB10hsa-miR-6865-5p87.346NM_016131
RAB10hsa-miR-60087.2398NM_016131
RAB10hsa-miR-6508-5p87.153NM_016131
RAB10hsa-miR-1236-3p87.1246NM_016131
RAB10hsa-miR-428286.4742NM_016131
RAB10hsa-miR-519d-3p86.4558NM_016131
RAB10hsa-miR-106a-5p86.4558NM_016131
RAB10hsa-miR-20a-5p86.4558NM_016131
RAB10hsa-miR-106b-5p86.4558NM_016131
RAB10hsa-miR-20b-5p86.4558NM_016131
RAB10hsa-miR-17-5p86.4558NM_016131
RAB10hsa-miR-93-5p86.4558NM_016131
RAB10hsa-miR-30086.33NM_016131
RAB10hsa-miR-676-3p86.1698NM_016131
RAB10hsa-miR-197686.0275NM_016131
RAB10hsa-miR-1213385.9224NM_016131
RAB10hsa-miR-1271-5p85.9224NM_016131
RAB10hsa-miR-7159-3p85.2732NM_016131
RAB10hsa-miR-4717-5p84.9906NM_016131
RAB10hsa-miR-624-5p84.9262NM_016131
RAB10hsa-miR-329-5p84.7322NM_016131
RAB10hsa-miR-806784.2697NM_016131
RAB10hsa-miR-3677-5p84.0612NM_016131
RAB10hsa-miR-6509-3p83.9351NM_016131
RAB10hsa-miR-1273h-3p83.7081NM_016131
RAB10hsa-miR-7844-5p83.5134NM_016131
RAB10hsa-miR-128483.4527NM_016131
RAB10hsa-miR-205-3p83.3409NM_016131
RAB10hsa-miR-451b82.8893NM_016131
RAB10hsa-miR-4520-3p82.859NM_016131
RAB10hsa-miR-316182.7413NM_016131
RAB10hsa-miR-451682.5644NM_016131
RAB10hsa-miR-6715a-3p82.3472NM_016131
RAB10hsa-miR-62282.1852NM_016131
RAB10hsa-miR-3678-3p81.6916NM_016131
RAB10hsa-miR-1301-3p81.2614NM_016131
RAB10hsa-miR-504781.2614NM_016131
RAB10hsa-miR-381-3p80.965NM_016131
RAB10hsa-miR-3160-3p80.791NM_016131
RAB10hsa-miR-58380.7894NM_016131
RAB10hsa-miR-392380.724NM_016131
RAB10hsa-miR-369-3p80.0835NM_016131
RAB10hsa-miR-493-5p80.0213NM_016131
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Motifs and transcription factors (TFs) regulating RAB10

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
RAB10metacluster_34.4ETS1; ETS1; ETS1; HCFC1; SIX5; SIX5; SIX5; SIX5; SMARCC2; SMARCC2; THAP11; THAP11; ZNF143; ZNF143; ZNF143; ZNF143 (directAnnotation). TBX2; THAP11; THAP11; ZNF143 (inferredBy_Orthology).
RAB10metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
RAB10transfac_pro__M04950EGR1 (directAnnotation).
RAB10transfac_pro__M00652NRF1 (directAnnotation).
RAB10swissregulon__hs__ELF2ELF2 (directAnnotation).
RAB10taipale_tf_pairs__HOXD12_ELK3_NTTTAYNNCCGGAARNN_CAP_reprELK3; HOXD12 (directAnnotation).
RAB10transfac_pro__M06331ZNF343 (directAnnotation).
RAB10hdpi__ZNF304ZNF304 (directAnnotation).
RAB10transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
RAB10metacluster_19.1GMEB2; GMEB2; GMEB2 (directAnnotation).
RAB10kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
RAB10dbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
RAB10transfac_pro__M06484ZNF683 (directAnnotation).
RAB10metacluster_155.34PRDM4 (directAnnotation).
RAB10transfac_pro__M05993ZNF711 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."