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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PTPRG

Summary for PTPRG

Gene informationGene symbol

PTPRG

Ensembl ID

ENSG00000144724

Entrez ID

5793

Gene nameprotein tyrosine phosphatase receptor type G
SynonymsPTPG|RPTPG
Gene typeprotein_coding
UniProtAcc

P23470


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Dataset with differentially expressed gene: PTPRG

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2723352.55e-31

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.3222940.00e+00

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Expression of PTPRG in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PTPRG

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PTPRG

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PTPRGhsa-miR-519e-3p92.7133NM_002841
PTPRGhsa-miR-515-3p92.7133NM_002841
PTPRGhsa-miR-430292.3726NM_002841
PTPRGhsa-miR-6768-3p92.2226NM_002841
PTPRGhsa-miR-6779-3p92.1365NM_002841
PTPRGhsa-miR-132392.1152NM_002841
PTPRGhsa-miR-196b-5p91.1236NM_002841
PTPRGhsa-miR-196a-5p91.1236NM_002841
PTPRGhsa-miR-64191.0545NM_002841
PTPRGhsa-miR-3617-5p91.0545NM_002841
PTPRGhsa-miR-1-3p90.8623NM_002841
PTPRGhsa-miR-20690.8623NM_002841
PTPRGhsa-miR-4670-3p90.611NM_002841
PTPRGhsa-miR-6777-3p90.5876NM_002841
PTPRGhsa-miR-120890.2166NM_002841
PTPRGhsa-miR-520d-5p90.2153NM_002841
PTPRGhsa-miR-7158-3p89.8672NM_002841
PTPRGhsa-miR-449c-5p89.7607NM_002841
PTPRGhsa-miR-34b-5p89.7607NM_002841
PTPRGhsa-miR-548o-3p89.7028NM_002841
PTPRGhsa-miR-33b-3p88.6031NM_002841
PTPRGhsa-miR-4703-5p88.2709NM_002841
PTPRGhsa-miR-3942-5p88.2709NM_002841
PTPRGhsa-miR-61388.2139NM_002841
PTPRGhsa-miR-181b-2-3p88.0507NM_002841
PTPRGhsa-miR-181b-3p88.0507NM_002841
PTPRGhsa-miR-653-3p87.8494NM_002841
PTPRGhsa-miR-2682-5p87.2998NM_002841
PTPRGhsa-miR-6894-3p86.111NM_002841
PTPRGhsa-miR-6854-3p85.973NM_002841
PTPRGhsa-miR-312885.8782NM_002841
PTPRGhsa-miR-4671-3p85.6209NM_002841
PTPRGhsa-miR-580-5p85.576NM_002841
PTPRGhsa-miR-524-5p85.0794NM_002841
PTPRGhsa-miR-374a-3p85.0077NM_002841
PTPRGhsa-miR-426484.4807NM_002841
PTPRGhsa-miR-442084.3375NM_002841
PTPRGhsa-miR-56284.1835NM_002841
PTPRGhsa-miR-605-3p83.8224NM_002841
PTPRGhsa-miR-153-5p83.5854NM_002841
PTPRGhsa-miR-5582-3p83.2859NM_002841
PTPRGhsa-miR-215-3p83.0288NM_002841
PTPRGhsa-miR-1233-5p82.6313NM_002841
PTPRGhsa-miR-6778-5p82.6313NM_002841
PTPRGhsa-miR-3613-3p82.5757NM_002841
PTPRGhsa-miR-446982.5344NM_002841
PTPRGhsa-miR-129482.3201NM_002841
PTPRGhsa-miR-998682.3201NM_002841
PTPRGhsa-miR-642a-3p81.9709NM_002841
PTPRGhsa-miR-642b-3p81.9709NM_002841
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Motifs and transcription factors (TFs) regulating PTPRG

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PTPRGkznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
PTPRGmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
PTPRGmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."