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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: PTEN

Summary for PTEN

Gene informationGene symbol

PTEN

Ensembl ID

ENSG00000284792

Entrez ID

5728

Gene namephosphatase and tensin homolog
SynonymsBZS|MHAM|MMAC1|PTEN1|TEP1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PTEN

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells-0.2595096.89e-12

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.497144.42e-12

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2818390.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.304460.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.4549770.00e+00

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Expression of PTEN in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PTEN

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

PTEN

Regulation by the Disease Microenvironment

PTEN

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating PTEN

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PTENhsa-miR-3616-3p92.1414NM_000314
PTENhsa-miR-568891.413NM_001304718
PTENhsa-miR-548a-3p91.3857NM_001304718
PTENhsa-miR-3135b91.0247NM_001304718
PTENhsa-miR-447090.8179NM_001304718
PTENhsa-miR-19a-3p90.6557NM_001304718
PTENhsa-miR-19b-3p90.6557NM_001304718
PTENhsa-miR-6507-5p90.5296NM_000314
PTENhsa-miR-367-5p90.3754NM_001304718
PTENhsa-miR-397490.3445NM_000314
PTENhsa-miR-495-3p90.03NM_001304718
PTENhsa-miR-4662a-5p89.7007NM_001304718
PTENhsa-miR-548av-3p88.7367NM_001304718
PTENhsa-miR-513b-3p88.4861NM_000314
PTENhsa-miR-6501-5p88.2979NM_001304718
PTENhsa-miR-474488.1815NM_001304718
PTENhsa-miR-144-3p87.9157NM_001304718
PTENhsa-miR-335-3p87.5556NM_000314
PTENhsa-miR-514a-3p87.353NM_000314
PTENhsa-miR-514b-3p87.353NM_000314
PTENhsa-miR-127986.6551NM_001304718
PTENhsa-miR-46686.6158NM_001304718
PTENhsa-miR-365885.6808NM_000314
PTENhsa-miR-806384.565NM_001304718
PTENhsa-miR-505-3p84.4984NM_000314
PTENhsa-miR-6512-5p83.8022NM_000314
PTENhsa-miR-6730-3p83.697NM_000314
PTENhsa-miR-6817-5p83.5677NM_001304718
PTENhsa-miR-4769-3p83.5677NM_001304718
PTENhsa-miR-472983.4298NM_001304718
PTENhsa-miR-430383.211NM_001304718
PTENhsa-miR-651-3p83.1808NM_000314
PTENhsa-miR-5189-5p83.0284NM_001304718
PTENhsa-miR-1285-3p83.0284NM_001304718
PTENhsa-miR-511-5p82.2437NM_001304718
PTENhsa-miR-432882.223NM_000314
PTENhsa-miR-3187-5p82.1591NM_001304718
PTENhsa-miR-61282.1591NM_001304718
PTENhsa-miR-686082.1591NM_001304718
PTENhsa-miR-59681.8414NM_001304718
PTENhsa-miR-10393-3p81.1755NM_001304718
PTENhsa-miR-6801-5p81.1755NM_001304718
PTENhsa-miR-394180.567NM_001304718
PTENhsa-miR-10523-5p80.4296NM_000314
PTENhsa-miR-372-5p80.4155NM_000314
PTENhsa-miR-548aw80.4112NM_001304718
PTENhsa-miR-889-3p80.2856NM_000314
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Motifs and transcription factors (TFs) regulating PTEN

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PTENhdpi__NFIXNFIX (directAnnotation).
PTENhdpi__ZNF193ZSCAN9 (directAnnotation).
PTENhdpi__TP73TP73 (directAnnotation).
PTENmetacluster_52.11ZNF184 (directAnnotation).
PTENtransfac_pro__M06917ZNF236 (directAnnotation).
PTENmetacluster_22.20MAFG (directAnnotation).
PTENmetacluster_26.3ZNF232 (directAnnotation).
PTENtransfac_public__M00240NKX2-5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
PTEN"Phosphatidylethanolamine"

DB04327

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."