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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PTBP2

Summary for PTBP2

Gene informationGene symbol

PTBP2

Ensembl ID

ENSG00000117569

Entrez ID

58155

Gene namepolypyrimidine tract binding protein 2
SynonymsbrPTB|nPTB|PTB|PTBLP
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: PTBP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.2707460.00e+00

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Expression of PTBP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PTBP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PTBP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PTBP2hsa-miR-4753-5p89.8627NM_001300985
PTBP2hsa-miR-548e-5p89.8531NM_001300986
PTBP2hsa-miR-6888-3p89.7212NM_001300986
PTBP2hsa-miR-512-3p89.2755NM_001300986
PTBP2hsa-miR-430388.9NM_001300986
PTBP2hsa-miR-4433a-5p88.6379NM_001300985
PTBP2hsa-miR-3064-3p88.2412NM_001300985
PTBP2hsa-miR-6751-3p88.175NM_001300986
PTBP2hsa-miR-1199-5p88.175NM_001300986
PTBP2hsa-miR-6752-3p87.7918NM_001300985
PTBP2hsa-miR-3613-3p87.3081NM_001300985
PTBP2hsa-miR-4699-5p87.111NM_001300986
PTBP2hsa-miR-5587-5p87.0196NM_001300985
PTBP2hsa-miR-6502-3p86.7952NM_001300985
PTBP2hsa-miR-6731-3p86.0266NM_001300986
PTBP2hsa-miR-5011-5p86.0154NM_001300986
PTBP2hsa-miR-450985.9397NM_001300985
PTBP2hsa-miR-391985.9014NM_001300985
PTBP2hsa-miR-428185.8435NM_001300985
PTBP2hsa-miR-208a-3p85.5412NM_001300985
PTBP2hsa-miR-208b-3p85.5412NM_001300985
PTBP2hsa-miR-4708-3p84.6147NM_001300986
PTBP2hsa-miR-6883-3p83.8291NM_001300985
PTBP2hsa-miR-474483.6754NM_001300986
PTBP2hsa-miR-5088-5p83.5352NM_001300986
PTBP2hsa-miR-3177-5p83.4604NM_001300985
PTBP2hsa-miR-361883.3268NM_001300986
PTBP2hsa-miR-205382.5336NM_001300986
PTBP2hsa-miR-569682.3992NM_001300985
PTBP2hsa-miR-133a-3p82.3777NM_001300985
PTBP2hsa-miR-133b82.3777NM_001300985
PTBP2hsa-miR-4697-3p82.0652NM_001300986
PTBP2hsa-miR-4768-3p82.0185NM_001300985
PTBP2hsa-miR-469882.0105NM_001300986
PTBP2hsa-miR-96-3p81.7377NM_001300986
PTBP2hsa-miR-426281.6815NM_001300986
PTBP2hsa-miR-3129-3p81.585NM_001300986
PTBP2hsa-miR-410-5p81.1892NM_001300986
PTBP2hsa-miR-323b-5p81.1892NM_001300986
PTBP2hsa-miR-494-5p81.1892NM_001300986
PTBP2hsa-miR-488-3p80.9551NM_001300986
PTBP2hsa-miR-7152-3p80.6105NM_001300985
PTBP2hsa-miR-371480.3877NM_001300985
PTBP2hsa-miR-5001-3p80.1351NM_001300985
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Motifs and transcription factors (TFs) regulating PTBP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PTBP2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PTBP2kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
PTBP2jaspar__MA1721.1ZNF93 (directAnnotation).
PTBP2metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PTBP2kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
PTBP2dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
PTBP2transfac_pro__M01199TRIM28 (directAnnotation).
PTBP2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PTBP2dbtfbs__ZSCAN30_HEK293_ENCSR768VNZ_merged_N1ZSCAN30 (directAnnotation).
PTBP2flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
PTBP2transfac_pro__M02913SP140 (inferredBy_Orthology).
PTBP2dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
PTBP2taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PTBP2jaspar__MA0748.2YY2 (directAnnotation).
PTBP2swissregulon__hs__CHD1CHD1 (directAnnotation).
PTBP2homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
PTBP2transfac_pro__M01090SMAD9 (inferredBy_Orthology).
PTBP2kznf__ZNF311_Imbeault2017_OM_MEMEZNF311 (directAnnotation).
PTBP2taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PTBP2jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
PTBP2transfac_pro__M00938E2F1 (directAnnotation).
PTBP2transfac_pro__M04893TAF1 (directAnnotation).
PTBP2transfac_pro__M01088DEAF1 (inferredBy_Orthology).
PTBP2transfac_pro__M12697ZNF142 (directAnnotation).
PTBP2metacluster_175.1ZNF283 (directAnnotation).
PTBP2cisbp__M00788ZFY (inferredBy_Orthology).
PTBP2tfdimers__MD00364WT1 (directAnnotation).
PTBP2metacluster_126.3LIN28B; LIN28B (directAnnotation).
PTBP2transfac_pro__M02786PLAGL1 (inferredBy_Orthology).
PTBP2transfac_pro__M01973PLAG1 (directAnnotation).
PTBP2metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
PTBP2tfdimers__MD00483ZBTB14 (directAnnotation).
PTBP2metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PTBP2hocomoco__XBP1_HUMAN.H11MO.0.DXBP1 (directAnnotation).
PTBP2taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
PTBP2metacluster_144.13HIC1; HIC1 (directAnnotation).
PTBP2transfac_pro__M00514ATF4 (directAnnotation).
PTBP2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
PTBP2transfac_pro__M02898SMAD3 (directAnnotation).
PTBP2kznf__ZNF548_Imbeault2017_OM_RCADEZNF548 (directAnnotation).
PTBP2metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
PTBP2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PTBP2metacluster_196.3NR1H4; NR2F6; PRDM14; ZNF264; ZNF264 (directAnnotation). HNF4A; HNF4G; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR1D2; NR1H2; NR1H2; NR1H2; NR1H3; NR1H3; NR1H3; NR1I2; NR1I2; NR1I2; NR2C1; NR2C2; NR2F2; NR2F6; PPARA; PPARA; PPARA; PPARD; PPARD; PPARD; PPARG; PPARG; PPARG; RARA; RARA; RARA; RARB; RARB; RARB; RORA; RORA; RORA; RORB; RORB; RORB; RORC; RORC; RORC; RXRA; RXRB; RXRG; THRA; THRA; THRA; VDR; VDR; VDR (inferredBy_Orthology).
PTBP2hocomoco__ZFP57_MOUSE.H11MO.0.BZFP57 (inferredBy_Orthology).
PTBP2taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PTBP2taipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
PTBP2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
PTBP2metacluster_126.4ZNF12; ZNF12; ZNF44; ZNF563; ZNF93 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."