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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PPM1E

Summary for PPM1E

Gene informationGene symbol

PPM1E

Ensembl ID

ENSG00000175175

Entrez ID

22843

Gene nameprotein phosphatase, Mg2+/Mn2+ dependent 1E
SynonymsCaMKP-N|KIAA1072|POPX1|PP2CH
Gene typeprotein_coding
UniProtAcc

Q8WY54


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Dataset with differentially expressed gene: PPM1E

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.2505211.45e-03

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Expression of PPM1E in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PPM1E

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PPM1E

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PPM1Ehsa-miR-3678-3p87.0077NM_014906
PPM1Ehsa-miR-94486.8512NM_014906
PPM1Ehsa-miR-4668-3p86.6692NM_014906
PPM1Ehsa-miR-6835-3p86.4316NM_014906
PPM1Ehsa-miR-513a-3p86.0513NM_014906
PPM1Ehsa-miR-513c-3p86.0513NM_014906
PPM1Ehsa-miR-200b-5p85.8317NM_014906
PPM1Ehsa-miR-200a-5p85.8317NM_014906
PPM1Ehsa-miR-10785.7367NM_014906
PPM1Ehsa-miR-103a-3p85.7367NM_014906
PPM1Ehsa-miR-6807-5p85.6519NM_014906
PPM1Ehsa-miR-684485.4632NM_014906
PPM1Ehsa-miR-4732-5p84.9813NM_014906
PPM1Ehsa-miR-127584.9068NM_014906
PPM1Ehsa-miR-3606-3p84.8794NM_014906
PPM1Ehsa-miR-3682-5p84.8101NM_014906
PPM1Ehsa-miR-1250-3p84.8041NM_014906
PPM1Ehsa-miR-365884.7224NM_014906
PPM1Ehsa-miR-4714-5p84.6397NM_014906
PPM1Ehsa-miR-5692a84.2823NM_014906
PPM1Ehsa-miR-570-3p84.269NM_014906
PPM1Ehsa-miR-335-3p84.2301NM_014906
PPM1Ehsa-miR-453983.828NM_014906
PPM1Ehsa-miR-4529-3p83.8214NM_014906
PPM1Ehsa-miR-428682.8799NM_014906
PPM1Ehsa-miR-316382.5671NM_014906
PPM1Ehsa-miR-751582.4246NM_014906
PPM1Ehsa-miR-1255b-2-3p82.338NM_014906
PPM1Ehsa-miR-323b-3p82.271NM_014906
PPM1Ehsa-miR-1211381.8117NM_014906
PPM1Ehsa-miR-6830-5p81.7914NM_014906
PPM1Ehsa-miR-1212481.6125NM_014906
PPM1Ehsa-miR-432481.6076NM_014906
PPM1Ehsa-miR-181b-2-3p81.3871NM_014906
PPM1Ehsa-miR-181b-3p81.3871NM_014906
PPM1Ehsa-miR-4423-3p81.1267NM_014906
PPM1Ehsa-miR-510-3p81.0562NM_014906
PPM1Ehsa-miR-4665-5p80.9295NM_014906
PPM1Ehsa-miR-197-3p80.9232NM_014906
PPM1Ehsa-miR-548e-5p80.8538NM_014906
PPM1Ehsa-miR-20a-3p80.7749NM_014906
PPM1Ehsa-miR-393880.5986NM_014906
PPM1Ehsa-miR-383-5p80.5716NM_014906
PPM1Ehsa-miR-64580.4817NM_014906
PPM1Ehsa-miR-6511b-3p80.4061NM_014906
PPM1Ehsa-miR-6511a-3p80.4061NM_014906
PPM1Ehsa-miR-378a-5p80.3359NM_014906
PPM1Ehsa-miR-428980.2721NM_014906
PPM1Ehsa-miR-364680.2146NM_014906
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Motifs and transcription factors (TFs) regulating PPM1E

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PPM1Ekznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
PPM1Emetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
PPM1Ekznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
PPM1Etransfac_pro__M04617ZBTB7A (directAnnotation).
PPM1Emetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
PPM1Ekznf__ZNF529_Imbeault2017_RP_ChIP-seqZNF529 (directAnnotation).
PPM1Etaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PPM1Etaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PPM1Etransfac_pro__M07387ZBTB7A (directAnnotation).
PPM1Etransfac_pro__M07436WT1 (directAnnotation).
PPM1Etransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
PPM1Etransfac_pro__M00716ZBTB14 (directAnnotation).
PPM1Eswissregulon__hs__CHD1CHD1 (directAnnotation).
PPM1Ehdpi__HIP2UBE2K (directAnnotation).
PPM1Etaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PPM1Emetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
PPM1Etransfac_pro__M04893TAF1 (directAnnotation).
PPM1Etransfac_pro__M03876ZBTB33 (directAnnotation).
PPM1Emetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
PPM1Emetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PPM1Ekznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
PPM1Etransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PPM1Emetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."