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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PIKFYVE

Summary for PIKFYVE

Gene informationGene symbol

PIKFYVE

Ensembl ID

ENSG00000115020

Entrez ID

200576

Gene namephosphoinositide kinase, FYVE-type zinc finger containing
SynonymsFAB1|KIAA0981|MGC40423|p235|PIP5K|PIP5K3|ZFYVE29
Gene typeprotein_coding
UniProtAcc

Q9Y2I7


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Dataset with differentially expressed gene: PIKFYVE

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.4111294.03e-18

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Expression of PIKFYVE in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PIKFYVE

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PIKFYVE

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PIKFYVEhsa-miR-153-5p87.057NM_015040
PIKFYVEhsa-miR-6736-3p87.0461NM_015040
PIKFYVEhsa-miR-3127-3p86.2846NM_015040
PIKFYVEhsa-miR-6756-3p86.2846NM_015040
PIKFYVEhsa-miR-3942-3p86.204NM_015040
PIKFYVEhsa-miR-6825-5p85.8723NM_001178000
PIKFYVEhsa-miR-590-3p85.1717NM_015040
PIKFYVEhsa-miR-200a-3p84.9287NM_015040
PIKFYVEhsa-miR-141-3p84.9287NM_015040
PIKFYVEhsa-miR-5007-3p84.4947NM_015040
PIKFYVEhsa-miR-508-3p84.113NM_015040
PIKFYVEhsa-miR-144-3p83.9459NM_015040
PIKFYVEhsa-miR-5585-3p83.7729NM_015040
PIKFYVEhsa-miR-314883.1024NM_015040
PIKFYVEhsa-miR-3155b83.0614NM_015040
PIKFYVEhsa-miR-3155a83.0614NM_015040
PIKFYVEhsa-miR-362-5p82.6923NM_015040
PIKFYVEhsa-miR-500b-5p82.6923NM_015040
PIKFYVEhsa-miR-95-5p82.6368NM_015040
PIKFYVEhsa-miR-468282.4225NM_015040
PIKFYVEhsa-miR-6875-3p81.9416NM_015040
PIKFYVEhsa-miR-3613-3p81.6265NM_015040
PIKFYVEhsa-miR-5009-3p81.272NM_015040
PIKFYVEhsa-miR-539-5p81.1031NM_015040
PIKFYVEhsa-miR-548ar-3p81.0964NM_015040
PIKFYVEhsa-miR-302e80.7627NM_015040
PIKFYVEhsa-miR-6839-3p80.7155NM_001178000
PIKFYVEhsa-miR-1211680.7078NM_001178000
PIKFYVEhsa-miR-302f80.5875NM_015040
PIKFYVEhsa-miR-548bc80.3813NM_015040
PIKFYVEhsa-miR-548az-3p80.3813NM_015040
PIKFYVEhsa-miR-548f-3p80.3813NM_015040
PIKFYVEhsa-miR-548e-3p80.3813NM_015040
PIKFYVEhsa-miR-519e-5p80.3376NM_015040
PIKFYVEhsa-miR-515-5p80.3376NM_015040
PIKFYVEhsa-miR-128380.3134NM_015040
PIKFYVEhsa-miR-130380.1327NM_001178000
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Motifs and transcription factors (TFs) regulating PIKFYVE

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PIKFYVEmetacluster_126.2ZBTB4; ZBTB4 (directAnnotation).
PIKFYVEtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PIKFYVEcisbp__M00249WT1 (directAnnotation).
PIKFYVEtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
PIKFYVEcisbp__M00968MTF2 (directAnnotation).
PIKFYVEcisbp__M00809PRDM11 (inferredBy_Orthology).
PIKFYVEmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
PIKFYVEtaipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
PIKFYVEtransfac_pro__M01122ZNF219 (directAnnotation).
PIKFYVEmetacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
PIKFYVEmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."