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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PGM2L1

Summary for PGM2L1

Gene informationGene symbol

PGM2L1

Ensembl ID

ENSG00000165434

Entrez ID

283209

Gene namephosphoglucomutase 2 like 1
SynonymsBM32A|FLJ32029
Gene typeprotein_coding
UniProtAcc

Q6PCE3


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Dataset with differentially expressed gene: PGM2L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5450530.00e+00

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Expression of PGM2L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PGM2L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PGM2L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PGM2L1hsa-miR-569688.0492NM_173582
PGM2L1hsa-miR-873-5p87.7537NM_173582
PGM2L1hsa-miR-320187.6645NM_173582
PGM2L1hsa-miR-60387.4874NM_173582
PGM2L1hsa-miR-519c-3p86.9065NM_173582
PGM2L1hsa-miR-519a-3p86.9065NM_173582
PGM2L1hsa-miR-519b-3p86.9065NM_173582
PGM2L1hsa-miR-428286.6251NM_173582
PGM2L1hsa-miR-367186.5222NM_173582
PGM2L1hsa-miR-135b-3p85.6395NM_173582
PGM2L1hsa-miR-135a-2-3p85.6395NM_173582
PGM2L1hsa-miR-1250-3p85.4763NM_173582
PGM2L1hsa-miR-60785.357NM_173582
PGM2L1hsa-miR-3136-5p83.5664NM_173582
PGM2L1hsa-miR-443983.5664NM_173582
PGM2L1hsa-miR-335-3p83.2735NM_173582
PGM2L1hsa-miR-469883.1487NM_173582
PGM2L1hsa-miR-450082.8211NM_173582
PGM2L1hsa-miR-6504-3p82.7509NM_173582
PGM2L1hsa-miR-6799-5p82.6481NM_173582
PGM2L1hsa-miR-6875-5p82.1919NM_173582
PGM2L1hsa-miR-3126-5p82.1919NM_173582
PGM2L1hsa-miR-122b-5p81.8015NM_173582
PGM2L1hsa-miR-393881.8015NM_173582
PGM2L1hsa-miR-410-3p81.6548NM_173582
PGM2L1hsa-miR-3135a81.4949NM_173582
PGM2L1hsa-miR-425181.2154NM_173582
PGM2L1hsa-miR-651-3p80.7542NM_173582
PGM2L1hsa-miR-568880.6328NM_173582
PGM2L1hsa-miR-471980.4111NM_173582
PGM2L1hsa-miR-6873-3p80.3483NM_173582
PGM2L1hsa-miR-6501-5p80.2064NM_173582
PGM2L1hsa-miR-1245a80.194NM_173582
PGM2L1hsa-miR-548aa80.1199NM_173582
PGM2L1hsa-miR-548t-3p80.1199NM_173582
PGM2L1hsa-miR-548ap-3p80.1199NM_173582
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Motifs and transcription factors (TFs) regulating PGM2L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PGM2L1metacluster_135.11NR2C2 (directAnnotation).
PGM2L1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
PGM2L1metacluster_198.3ZFP64 (directAnnotation).
PGM2L1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
PGM2L1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
PGM2L1metacluster_175.1ZNF283 (directAnnotation).
PGM2L1transfac_pro__M02844BCL6B (inferredBy_Orthology).
PGM2L1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
PGM2L1metacluster_151.2ZNF23 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."