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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: PCNX1

Summary for PCNX1

Gene informationGene symbol

PCNX1

Ensembl ID

ENSG00000100731

Entrez ID

22990

Gene namepecanex 1
SynonymsKIAA0805|KIAA0995|PCNX|PCNXL1|pecanex
Gene typeprotein_coding
UniProtAcc

Q96RV3


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Dataset with differentially expressed gene: PCNX1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.2607791.08e-05

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postFibroblasts-0.6214888.70e-03

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Expression of PCNX1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to PCNX1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating PCNX1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
PCNX1hsa-miR-464186.1118NM_014982
PCNX1hsa-miR-2116-5p85.6128NM_014982
PCNX1hsa-miR-130a-3p85.4409NM_014982
PCNX1hsa-miR-133a-5p85.4295NM_014982
PCNX1hsa-miR-467285.412NM_014982
PCNX1hsa-miR-848585.3801NM_014982
PCNX1hsa-miR-330-5p85.3121NM_014982
PCNX1hsa-miR-318285.1456NM_014982
PCNX1hsa-miR-7856-5p84.1731NM_014982
PCNX1hsa-miR-7111-3p83.9511NM_014982
PCNX1hsa-miR-590-3p83.9384NM_014982
PCNX1hsa-miR-125b-2-3p83.7128NM_014982
PCNX1hsa-miR-5681a83.5689NM_014982
PCNX1hsa-miR-301b-3p83.2713NM_014982
PCNX1hsa-miR-130b-3p83.2713NM_014982
PCNX1hsa-miR-429583.2713NM_014982
PCNX1hsa-miR-366683.2713NM_014982
PCNX1hsa-miR-301a-3p83.2713NM_014982
PCNX1hsa-miR-329-5p82.4811NM_014982
PCNX1hsa-miR-32682.3342NM_014982
PCNX1hsa-miR-447382.3236NM_014982
PCNX1hsa-miR-6806-5p82.2298NM_014982
PCNX1hsa-miR-345-3p82.2291NM_014982
PCNX1hsa-miR-181a-2-3p82.1778NM_014982
PCNX1hsa-miR-3191-5p82.1184NM_014982
PCNX1hsa-miR-4482-3p82.0366NM_014982
PCNX1hsa-miR-316381.8911NM_014982
PCNX1hsa-miR-511-5p81.8551NM_014982
PCNX1hsa-miR-561-5p81.8465NM_014982
PCNX1hsa-miR-548at-5p81.7563NM_014982
PCNX1hsa-miR-4680-3p81.6968NM_014982
PCNX1hsa-miR-548c-3p81.4845NM_014982
PCNX1hsa-miR-146a-3p81.474NM_014982
PCNX1hsa-miR-10527-5p81.3275NM_014982
PCNX1hsa-miR-485-5p81.0577NM_014982
PCNX1hsa-miR-6884-5p81.0577NM_014982
PCNX1hsa-miR-425180.727NM_014982
PCNX1hsa-miR-1212080.2958NM_014982
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Motifs and transcription factors (TFs) regulating PCNX1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
PCNX1taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
PCNX1dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
PCNX1swissregulon__hs__CHD1CHD1 (directAnnotation).
PCNX1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
PCNX1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
PCNX1kznf__ZNF846_Imbeault2017_RP_ChIP-seqZNF846 (directAnnotation).
PCNX1transfac_pro__M12686ZBTB10 (directAnnotation).
PCNX1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
PCNX1metacluster_143.14ZNF320 (directAnnotation).
PCNX1kznf__ZNF383_Imbeault2017_RP_RCADEZNF383 (directAnnotation).
PCNX1dbtfbs__ZBTB10_HEK293_ENCSR004PLU_merged_N1ZBTB10 (directAnnotation).
PCNX1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
PCNX1taipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
PCNX1metacluster_23.9GLIS1; GLIS3; GLIS3; ZNF575 (directAnnotation). GLIS2; GLIS2; GLIS3; ZNF575; ZXDA; ZXDA; ZXDA; ZXDA; ZXDB; ZXDB; ZXDB; ZXDB; ZXDC; ZXDC; ZXDC; ZXDC (inferredBy_Orthology).
PCNX1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
PCNX1kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
PCNX1kznf__ZNF141_Imbeault2017_RP_RCADEZNF141 (directAnnotation).
PCNX1transfac_pro__M04617ZBTB7A (directAnnotation).
PCNX1transfac_pro__M01973PLAG1 (directAnnotation).
PCNX1metacluster_151.2ZNF23 (directAnnotation).
PCNX1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
PCNX1taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PCNX1metacluster_66.1MTF1; ZNF320; ZNF320; ZNF320; ZNF782 (directAnnotation).
PCNX1cisbp__M01864EGR1 (inferredBy_Orthology).
PCNX1tfdimers__MD00391KLF4 (directAnnotation).
PCNX1kznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
PCNX1transfac_pro__M05479ZNF580 (directAnnotation).
PCNX1tfdimers__MD00151CHURC1 (directAnnotation).
PCNX1transfac_pro__M04817ZBTB33 (directAnnotation).
PCNX1cisbp__M00139ZNF281 (inferredBy_Orthology).
PCNX1taipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
PCNX1metacluster_144.5ZNF610; ZNF610; ZNF610 (directAnnotation).
PCNX1transfac_public__M00491PATZ1 (directAnnotation).
PCNX1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
PCNX1metacluster_3.10KLF2; KLF4 (directAnnotation).
PCNX1jaspar__MA1122.1TFDP1 (directAnnotation).
PCNX1kznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
PCNX1transfac_pro__M01253CNOT3 (directAnnotation).
PCNX1metacluster_159.5ZIC1; ZIC4; ZNF423 (directAnnotation). SP1 (inferredBy_Orthology).
PCNX1cisbp__M00968MTF2 (directAnnotation).
PCNX1tfdimers__MD00038TFAP2C (directAnnotation).
PCNX1taipale_tf_pairs__E2F3_TBX21_NGGTGTGNNGGCGCSN_CAP_reprE2F3; TBX21 (directAnnotation).
PCNX1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
PCNX1transfac_pro__M01199TRIM28 (directAnnotation).
PCNX1metacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
PCNX1metacluster_3.14WT1; WT1 (directAnnotation).
PCNX1transfac_pro__M12697ZNF142 (directAnnotation).
PCNX1metacluster_84.2RARA (directAnnotation).
PCNX1transfac_pro__M01122ZNF219 (directAnnotation).
PCNX1transfac_pro__M07387ZBTB7A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."